RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CFDP00746 253 aaPredicted RBP12.79□□□□□ -0.36
RANBP3-229ENST00000592771 UMODP07911 640 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 PTGDSP41222 190 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 SOX2P48431 317 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 PCGF3Q3KNV8 242 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 KRT77Q7Z794 578 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 GPAT4Q86UL3 456 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 SPERTQ8NA61 448 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 OR6N2Q8NGY6 317 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 OTOSQ8NHW6 89 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 GCDHQ92947 438 aaPredicted RBP12.79□□□□□ -0.36
RANBP3-229ENST00000592771 TMEM106AQ96A25 262 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 ELMOD3Q96FG2 381 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 SMOC1Q9H4F8 434 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
RANBP3-229ENST00000592771 SPEGQ15772 3267 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 ALPK2Q86TB3 2170 aa12.79□□□□□ -0.36
RANBP3-229ENST00000592771 B4E171 279 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 DCTN6O00399 190 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 BET1O15155 118 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 OR2T1O43869 369 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 AHSA1O95433 338 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 IGHMP01871 453 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 KLK3P07288 261 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 CXCL2P19875 107 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 ANXA7P20073 488 aaKnown RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 ENPP1P22413 925 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 MPLP40238 635 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 TSPAN7P41732 249 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 MAGEB1P43366 347 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 GMFBP60983 142 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 SEC61A1P61619 476 aaKnown RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 LPAL2Q16609 132 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 SLC25A53Q5H9E4 307 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 CDH26Q8IXH8 852 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 ZNF519Q8TB69 540 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 SLC22A8Q8TCC7 542 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 PMEPA1Q969W9 287 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 TSSK2Q96PF2 358 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 CA10Q9NS85 328 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 UPB1Q9UBR1 384 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 GPN3Q9UHW5 284 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 ING1Q9UK53 422 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 HRH3Q9Y5N1 445 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 RALGAPA1Q6GYQ0 2036 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 hCG_1807616A0A1W2PRN6 198 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 SLC17A2O00624 439 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 CTAG2O75638 210 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 KLF7O75840 302 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 AKR7A3O95154 331 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 MSX1P28360 303 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 S100A11P31949 105 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 CCKBRP32239 447 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 APOBEC1P41238 236 aaKnown RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 RPS15P62841 145 aaKnown RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 TAGLNQ01995 201 aaKnown RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 OR5M10Q6IEU7 315 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 ATOH1Q92858 354 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 MR1Q95460 341 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 IMMP1LQ96LU5 166 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 NPAS1Q99742 590 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 DEFB126Q9BYW3 111 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 OR11A1Q9GZK7 315 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 ZNF700Q9H0M5 742 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 RDH8Q9NYR8 311 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-229ENST00000592771 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
RANBP3-229ENST00000592771 TRAV8-7A0A075B6U6 113 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 IGHV1-45A0A0A0MS14 117 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 LOC100289279A0A1B0GTE1 492 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 PYCARD-AS1I3L0S3 204 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 PLPP3O14495 311 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 ZNF208O43345 1280 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 RP2O75695 350 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 OR2J2O76002 312 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 MAS1P04201 325 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 CD37P11049 281 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 PPP3CBP16298 524 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 PRSS3P35030 304 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 ACTBP60709 375 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 RPL27P61353 136 aaKnown RBP12.77□□□□□ -0.37
RANBP3-229ENST00000592771 ACTG1P63261 375 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 RAB11BQ15907 218 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 TEX30Q5JUR7 227 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 TCEAL6Q6IPX3 200 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 DPY19L4Q7Z388 723 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 PRSS35Q8N3Z0 413 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 OR10G3Q8NGC4 313 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 OR4C16Q8NGL9 310 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 SCARB1Q8WTV0 552 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 TCEAL3Q969E4 200 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 SLC25A36Q96CQ1 311 aa12.77□□□□□ -0.37
RANBP3-229ENST00000592771 SPACA9Q96E40 222 aaPredicted RBP12.77□□□□□ -0.37
RANBP3-229ENST00000592771 LOXL4Q96JB6 756 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms