RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SKA3Q8IX90 412 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 LRRC18Q8N456 261 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.53□□□□□ -0.24
NCLN-203ENST00000587740 OR52E2Q8NGJ4 325 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 OR4Q3Q8NH05 313 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 FBXO17Q96EF6 278 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 SNX18Q96RF0 628 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 NMNAT3Q96T66 252 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 SH3GL3Q99963 347 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 GABARAPL1Q9H0R8 117 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 KRT84Q9NSB2 600 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 KLHL21Q9UJP4 597 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 OAZ3Q9UMX2 235 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
NCLN-203ENST00000587740 ATP6V1G2-DDX39BF2Z307 99 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 IFNGP01579 166 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 HLA-HP01893 362 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 BMP4P12644 408 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 CBR1P16152 277 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 CTLA4P16410 223 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 ARR3P36575 388 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 MRPS34P82930 218 aaKnown RBP13.52□□□□□ -0.25
NCLN-203ENST00000587740 PIGFQ07326 219 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 GSG1Q2KHT4 349 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 SLC16A14Q7RTX9 510 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 DPPA2Q7Z7J5 298 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 MDP1Q86V88 176 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 FAM169BQ8N8A8 192 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 NUAK2Q9H093 628 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 RNF121Q9H920 327 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 SRA1Q9HD15 236 aaKnown RBP13.52□□□□□ -0.25
NCLN-203ENST00000587740 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.25
NCLN-203ENST00000587740 CRNNQ9UBG3 495 aaPredicted RBP13.52□□□□□ -0.25
NCLN-203ENST00000587740 LRP5LA4QPB2 252 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 KCNAB3O43448 404 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 RAB36O95755 333 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 BAG2O95816 211 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 GRK5P34947 590 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 GIPRP48546 466 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 CENPAP49450 140 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 CRISP1P54107 249 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 RAB1AP62820 205 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 NPRL3Q12980 569 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 GINS1Q14691 196 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 CARTPTQ16568 116 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 C3orf36Q3SXR2 165 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 SLC36A2Q495M3 483 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 KDM4DQ6B0I6 523 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 TMEM53Q6P2H8 277 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 C12orf54Q6X4T0 127 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 FOXL2NBQ6ZUU3 175 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 NPEPL1Q8NDH3 523 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 RBM4BQ9BQ04 359 aaKnown RBP13.51□□□□□ -0.25
NCLN-203ENST00000587740 RBM4Q9BWF3 364 aaKnown RBP13.51□□□□□ -0.25
NCLN-203ENST00000587740 OSBPL10Q9BXB5 764 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 TEX12Q9BXU0 123 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 BPESC1Q9GZL8 116 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 CCNB1IP1Q9NPC3 277 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 RPRD1BQ9NQG5 326 aaKnown RBP13.51□□□□□ -0.25
NCLN-203ENST00000587740 ZNF224Q9NZL3 707 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 ENOPH1Q9UHY7 261 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 B9D1Q9UPM9 204 aa13.51□□□□□ -0.25
NCLN-203ENST00000587740 COA3Q9Y2R0 106 aaPredicted RBP13.51□□□□□ -0.25
NCLN-203ENST00000587740 IGHV1-18A0A0C4DH31 117 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 LOC390937A0A1W2PQ73 354 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 OR6C68A6NDL8 312 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 RIIAD1A6NNX1 92 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 IGKV3-15P01624 115 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 HMGN1P05114 100 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 PATE4P0C8F1 98 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 ZNF3P17036 446 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 MSR1P21757 451 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 LAP3P28838 519 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 IL2RGP31785 369 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 PTDSS1P48651 473 aaKnown RBP13.5□□□□□ -0.25
NCLN-203ENST00000587740 IDH3GP51553 393 aaPredicted RBP13.5□□□□□ -0.25
NCLN-203ENST00000587740 ESRRGP62508 458 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 CDK5Q00535 292 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 FAM27BQ5VT28 67 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 GLB1L2Q8IW92 636 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 OR6V1Q8N148 313 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 PQLC1Q8N2U9 271 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 CYB561A3Q8NBI2 242 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 SLC37A3Q8NCC5 494 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 TSSK2Q96PF2 358 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 CIB1Q99828 191 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 KCNS3Q9BQ31 491 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 FN3KQ9H479 309 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 POLE4Q9NR33 117 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 CMC2Q9NRP2 79 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 FBXL3Q9UKT7 428 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 MOKQ9UQ07 419 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 FKBP7Q9Y680 259 aa13.5□□□□□ -0.25
NCLN-203ENST00000587740 PKD1L1Q8TDX9 2849 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms