RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NOX4Q9NPH5 578 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 GDF2Q9UK05 429 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-204ENST00000587339 FBXL3Q9UKT7 428 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 CMAHPQ9Y471 501 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 CACNA1CQ13936 2221 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 TFECO14948 347 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-204ENST00000587339 MSR1P21757 451 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 MAPK3P27361 379 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-204ENST00000587339 TNFSF8P32971 234 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF84P51523 738 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 PPP5CP53041 499 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 MFGE8Q08431 387 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-204ENST00000587339 DDI2Q5TDH0 399 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 CFAP77Q6ZQR2 320 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 CCDC190Q86UF4 302 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 R4GMQ9 66 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 GPR171O14626 319 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF24P17028 368 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 RAB3BP20337 219 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 CD40LGP29965 261 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 ETV6P41212 452 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 MAGEB1P43366 347 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 LSM6P62312 80 aaKnown RBP17.55■□□□□ 0.4
TRIM47-204ENST00000587339 CHMP1BQ7LBR1 199 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 RDH10Q8IZV5 341 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 PARP16Q8N5Y8 322 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 GPR148Q8TDV2 347 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 DERL3Q96Q80 235 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 ATF6BQ99941 703 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 SLC30A2Q9BRI3 323 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 PRRG4Q9BZD6 226 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 SLC22A13Q9Y226 551 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 EMC9Q9Y3B6 208 aa17.55■□□□□ 0.4
TRIM47-204ENST00000587339 IGKV3D-15A0A087WSY6 115 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 SRSF10O75494 262 aaKnown RBP17.54■□□□□ 0.4
TRIM47-204ENST00000587339 SRMP19623 302 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 OR10A3P58181 314 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 FOXL2NBQ6ZUU3 175 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 RHOUQ7L0Q8 258 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 CATSPERDQ86XM0 798 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 OR10S1Q8NGN2 331 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 FNDC9Q8TBE3 224 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF416Q9BWM5 594 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 CRLF2Q9HC73 371 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 ABCB9Q9NP78 766 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 COMMD3Q9UBI1 195 aa17.54■□□□□ 0.4
TRIM47-204ENST00000587339 TRBV5-5A0A0J9YX44 114 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 TMEM269A0A1B0GVZ9 245 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF878C9JN71 531 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 LOC110117498-PIK3R3F6TDL0 507 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 PIN1P1O15428 100 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 C3AR1Q16581 482 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 IDNKQ5T6J7 187 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 SFXN4Q6P4A7 337 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 KLHL24Q6TFL4 600 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 GPR137CQ8N3F9 429 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 ZADH2Q8N4Q0 377 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 IL17RDQ8NFM7 739 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 WDFY2Q96P53 400 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 B3GNT3Q9Y2A9 372 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 NOSIPQ9Y314 301 aaKnown RBP17.53■□□□□ 0.4
TRIM47-204ENST00000587339 RER1O15258 196 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 DCTDP32321 178 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 SOX2P48431 317 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 MMP16P51512 607 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 MZT2AQ6P582 158 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 PLXDC2Q6UX71 529 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 SYT9Q86SS6 491 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 OR51A4Q8NGJ6 313 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 OR10AC1Q8NH08 325 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 ACOT12Q8WYK0 555 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 PPP1R14AQ96A00 147 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 NABP1Q96AH0 204 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 TMEM45BQ96B21 275 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 ORAI1Q96D31 301 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF837Q96EG3 531 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-204ENST00000587339 ALKBH3Q96Q83 286 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-204ENST00000587339 B3GAT2Q9NPZ5 323 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 EMC3Q9P0I2 261 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 SPRR3Q9UBC9 169 aa17.53■□□□□ 0.4
TRIM47-204ENST00000587339 MRPL33O75394 65 aaKnown RBP17.52■□□□□ 0.4
TRIM47-204ENST00000587339 CPN1P15169 458 aa17.52■□□□□ 0.4
TRIM47-204ENST00000587339 TMEM106AQ96A25 262 aa17.52■□□□□ 0.4
TRIM47-204ENST00000587339 MIXL1Q9H2W2 232 aa17.52■□□□□ 0.4
TRIM47-204ENST00000587339 DAPK2Q9UIK4 370 aa17.52■□□□□ 0.4
TRIM47-204ENST00000587339 OR52A1Q9UKL2 312 aa17.52■□□□□ 0.4
TRIM47-204ENST00000587339 H3BSH0 61 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 DLL1O00548 723 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 RAF1P04049 648 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 HSD11B1P28845 292 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 MRPS34P82930 218 aaKnown RBP17.51■□□□□ 0.39
TRIM47-204ENST00000587339 TAF13Q15543 124 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 RIPPLY2Q5TAB7 128 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 LRRC18Q8N456 261 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 TSEN15Q8WW01 171 aaKnown RBP17.51■□□□□ 0.39
TRIM47-204ENST00000587339 THRSPQ92748 146 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 KCTD12Q96CX2 325 aaKnown RBP17.51■□□□□ 0.39
TRIM47-204ENST00000587339 WDYHV1Q96HA8 205 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 ZNF407Q9C0G0 2248 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 FRYQ5TBA9 3013 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms