RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PSME3P61289 254 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 ERVS71-1P61550 626 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 CCL8P80075 99 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
CCDC47-206ENST00000584112 FHL1Q13642 323 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 DOC2BQ14184 412 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 ZBED5Q49AG3 693 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 ARL9Q6T311 187 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 AKR7LQ8NHP1 331 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 CLDND2Q8NHS1 167 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 ZNF570Q96NI8 536 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 OR2H1Q9GZK4 316 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 NSRP1Q9H0G5 558 aaKnown RBP9.47□□□□□ -0.89
CCDC47-206ENST00000584112 RACGAP1Q9H0H5 632 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 NMNAT1Q9HAN9 279 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-206ENST00000584112 ELOVL3Q9HB03 270 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 SPAG4Q9NPE6 437 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 KRCC1Q9NPI7 259 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-206ENST00000584112 ESM1Q9NQ30 184 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 GAR1Q9NY12 217 aaKnown RBP9.47□□□□□ -0.89
CCDC47-206ENST00000584112 ABCD2Q9UBJ2 740 aa9.47□□□□□ -0.89
CCDC47-206ENST00000584112 CGGBP1Q9UFW8 167 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-206ENST00000584112 SAMD4AQ9UPU9 718 aaKnown RBP9.47□□□□□ -0.89
CCDC47-206ENST00000584112 LOC100509620A0A075B734 347 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 IGHV1-69-2A0A0G2JMI3 117 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 A0A1W2PRQ8 180 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 CDC42EP2O14613 210 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ATP8B1O43520 1251 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ICMTO60725 284 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 RP2O75695 350 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 NCK1P16333 377 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 RHCEP18577 417 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 FUT4P22083 530 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 LIPAP38571 399 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 WNT5AP41221 380 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 CRYBB2P43320 205 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ZNF81P51508 661 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ARHGDIAP52565 204 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 PPP1CBP62140 327 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 SCGB2A2Q13296 93 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 DGCR6Q14129 220 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ZMAT1Q5H9K5 638 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 MBNL2Q5VZF2 373 aaKnown RBP9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ZER1Q7Z7L7 766 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ZNF101Q8IZC7 436 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 CLDN22Q8N7P3 220 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 OR51F2Q8NH61 342 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 SLC25A40Q8TBP6 338 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 SLC7A13Q8TCU3 470 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ELMOD3Q96FG2 381 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 MARS2Q96GW9 593 aaKnown RBP9.46□□□□□ -0.9
CCDC47-206ENST00000584112 ELAC2Q9BQ52 826 aaKnown RBP9.46□□□□□ -0.9
CCDC47-206ENST00000584112 WNT5BQ9H1J7 359 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 MYLK2Q9H1R3 596 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 NARFLQ9H6Q4 476 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 SAP30LQ9HAJ7 183 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 POLE4Q9NR33 117 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 CYSLTR2Q9NS75 346 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 NDRG4Q9ULP0 352 aaKnown RBP9.46□□□□□ -0.9
CCDC47-206ENST00000584112 GRIP1Q9Y3R0 1128 aa9.46□□□□□ -0.9
CCDC47-206ENST00000584112 PRSS37A4D1T9 235 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 CLDN25C9JDP6 229 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 H7C1C5 153 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 CDC14BO60729 498 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 NDUFB2O95178 105 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 HKR1P10072 659 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 GAAP10253 952 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 COX5BP10606 129 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 ANPEPP15144 967 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TUBG1P23258 451 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 SDHAP31040 664 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 LIMS1P48059 325 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 LCN6P62502 163 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 GLO1Q04760 184 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 SLC3A1Q07837 685 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 SCRN3Q0VDG4 424 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 ENDOGQ14249 297 aaKnown RBP9.45□□□□□ -0.9
CCDC47-206ENST00000584112 KRT72Q14CN4 511 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TSTQ16762 297 aaKnown RBP9.45□□□□□ -0.9
CCDC47-206ENST00000584112 HFEQ30201 348 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 MESTQ5EB52 335 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 FGD3Q5JSP0 725 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 SPATA46Q5T0L3 261 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 GPR139Q6DWJ6 353 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 GLYATQ6IB77 296 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 ZNF774Q6NX45 483 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TBPL2Q6SJ96 375 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 THSD4Q6ZMP0 1018 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 USP51Q70EK9 711 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 FAM122BQ7Z309 247 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 NPEPL1Q8NDH3 523 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 ABHD4Q8TB40 342 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 KLF14Q8TD94 323 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-206ENST00000584112 IPCEF1Q8WWN9 437 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TMEM186Q96B77 213 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 RAB39BQ96DA2 213 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TIMD4Q96H15 378 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 FAM46AQ96IP4 442 aaKnown RBP9.45□□□□□ -0.9
CCDC47-206ENST00000584112 C4orf45Q96LM5 186 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 Q96M85 177 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms