RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KCNG2Q9UJ96 466 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 UGT2A1Q9Y4X1 527 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 TMEM14AQ9Y6G1 99 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 CELSR2Q9HCU4 2923 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 A6NNC1 897 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 SMIM18P0DKX4 95 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 MYL12AP19105 171 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 NR1H2P55055 460 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 HSF2Q03933 536 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 TBCEQ15813 527 aaPredicted RBP13.55□□□□□ -0.24
SS18-216ENST00000580751 BEX5Q5H9J7 111 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 TEX30Q5JUR7 227 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 FOXL2NBQ6ZUU3 175 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 GLB1L2Q8IW92 636 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 SPARTQ8N0X7 666 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 ACBD7Q8N6N7 88 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 OR52I1Q8NGK6 324 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 C14orf79Q96F83 325 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 YIPF3Q9GZM5 350 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 SIAEQ9HAT2 523 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 SRA1Q9HD15 236 aaKnown RBP13.55□□□□□ -0.24
SS18-216ENST00000580751 DCHS2Q6V1P9 2916 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 ABCA4P78363 2273 aa13.55□□□□□ -0.24
SS18-216ENST00000580751 SETXQ7Z333 2677 aaKnown RBP13.54□□□□□ -0.24
SS18-216ENST00000580751 A0A1W2PPL8 197 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 A0A1W2PR80 420 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 PHYHO14832 338 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 UBL3O95164 117 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 JUNBP17275 347 aaPredicted RBP13.54□□□□□ -0.24
SS18-216ENST00000580751 BLMHQ13867 455 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 IRF3Q14653 427 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 KCNMB1Q16558 191 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 SLC36A2Q495M3 483 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 ZNF787Q6DD87 383 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 HIST2H2BCQ6DN03 193 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 TMEM154Q6P9G4 183 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 SEZ6L2Q6UXD5 910 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 SLC16A9Q7RTY1 509 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 ZNF454Q8N9F8 522 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 OR6K6Q8NGW6 343 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 WACQ9BTA9 647 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 KCNN2Q9H2S1 579 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 RERGLQ9H628 205 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 ESRP2Q9H6T0 727 aaKnown RBP13.54□□□□□ -0.24
SS18-216ENST00000580751 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 ADGRL4Q9HBW9 690 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 ERVK-18Q9QC07 812 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 ERGIC3Q9Y282 383 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 PRR14LQ5THK1 2151 aa13.54□□□□□ -0.24
SS18-216ENST00000580751 TMEM129A0AVI4 362 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 DCTN6O00399 190 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 GYPBP06028 91 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 HTR1AP08908 422 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 CLUP10909 449 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 MSR1P21757 451 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 LAP3P28838 519 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 SSTR2P30874 369 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 CDAP32320 146 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 TTKP33981 857 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 RPL5P46777 297 aaKnown RBP13.53□□□□□ -0.24
SS18-216ENST00000580751 ETFDHQ16134 617 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 SGCAQ16586 387 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 PCK2Q16822 640 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 GSG1Q2KHT4 349 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 FAM27BQ5VT28 67 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 TMEM108Q6UXF1 575 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 SHFQ7M4L6 423 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 SLC16A14Q7RTX9 510 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 SKA3Q8IX90 412 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 TIGD4Q8IY51 512 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 FAM169BQ8N8A8 192 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 OR51G2Q8NGK0 314 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 HAVCR2Q8TDQ0 301 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 NABP1Q96AH0 204 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 MND1Q9BWT6 205 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 POLE4Q9NR33 117 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 BATF3Q9NR55 127 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 FBXL3Q9UKT7 428 aa13.53□□□□□ -0.24
SS18-216ENST00000580751 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.52□□□□□ -0.25
SS18-216ENST00000580751 DEFB108AA8MXU0 73 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 TMCC2O75069 709 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 HLA-HP01893 362 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 CD79AP11912 226 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 C21orf33P30042 268 aaPredicted RBP13.52□□□□□ -0.25
SS18-216ENST00000580751 PYCR1P32322 319 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 ARR3P36575 388 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 ZNF83P51522 516 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 CDH15P55291 814 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 TUBA1BP68363 451 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 EMX1Q04741 257 aaPredicted RBP13.52□□□□□ -0.25
SS18-216ENST00000580751 C3orf36Q3SXR2 165 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 TUBA1AQ71U36 451 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 ZNF295-AS1Q8N0V1 137 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 SLC26A10Q8NG04 563 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 OR52N1Q8NH53 320 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 HTRA1Q92743 480 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 ZMYND19Q96E35 227 aaPredicted RBP13.52□□□□□ -0.25
SS18-216ENST00000580751 TSSK2Q96PF2 358 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms