RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 RAB3BP20337 219 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 THBS2P35442 1172 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PMP22Q01453 160 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TLE3Q04726 772 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ACKR1Q16570 336 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SGCBQ16585 318 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MESTQ5EB52 335 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CREB3L2Q70SY1 520 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 BTN2A1Q7KYR7 527 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GPAT4Q86UL3 456 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 DCBLD2Q96PD2 775 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 DDOQ99489 341 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 IKZF2Q9UKS7 526 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 HSPB11Q9Y547 144 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 LEUTXA8MZ59 168 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TNFSF11O14788 317 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR2T1O43869 369 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC19A2O60779 497 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 RENP00797 406 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MT-ATP6P00846 226 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 IGF2P01344 180 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SP1P08047 785 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CD3GP09693 182 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SNRPBP14678 240 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CAPZA2P47755 286 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 DLX5P56178 289 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ESCO2Q56NI9 601 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 LINC01590Q5TEZ4 76 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 RPL22L1Q6P5R6 122 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PM20D2Q8IYS1 436 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TRMT10AQ8TBZ6 339 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ACOT12Q8WYK0 555 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF775Q96BV0 537 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 KCNN3Q9UGI6 736 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 AK6Q9Y3D8 172 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF407Q9C0G0 2248 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 A0A0J9YW62 118 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF891A8MT65 544 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ITGB2P05107 769 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GAAP10253 952 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 M6PRP20645 277 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PRKACBP22694 351 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 EIF1P41567 113 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC25A25Q6KCM7 469 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR6V1Q8N148 313 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MDS2Q8NDY4 140 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MFSD8Q8NHS3 518 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZC3HAV1LQ96H79 300 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 FAM173AQ9BQD7 235 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TTTY12Q9BZ98 90 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 NARFLQ9H6Q4 476 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 BEX1Q9HBH7 125 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 DIABLOQ9NR28 239 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ING3Q9NXR8 418 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 KLHL13Q9P2N7 655 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC23A1Q9UHI7 598 aa11.31□□□□□ -0.6
CDK5RAP3-217ENST00000580287 A0A0G2JK05 382 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ACOD1A6NK06 481 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PRR32B1ATL7 298 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SULT2B1O00204 365 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SHOXO15266 292 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OGG1O15527 345 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 HLA-DQB1P01920 261 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ADRB1P08588 477 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 IFNGR1P15260 489 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 POU3F1Q03052 451 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PUDPQ08623 228 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MRPL28Q13084 256 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MFAP5Q13361 173 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ODF4Q2M2E3 257 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 RNFT1Q5M7Z0 435 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 H1FNTQ75WM6 255 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TRILQ7L0X0 811 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PRSS45Q7RTY3 260 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TPRA1Q86W33 373 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR2T4Q8NH00 348 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 THEM6Q8WUY1 208 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 HSD17B8Q92506 261 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SFXN2Q96NB2 322 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC25A18Q9H1K4 315 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MRPL15Q9P015 296 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 LAMP5Q9UJQ1 280 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SPEF1Q9Y4P9 236 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 K7EM74 188 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ARL6IP5O75915 188 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC34A2O95436 690 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ADH6P28332 368 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SRD5A2P31213 254 aa11.3□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MEOX1P50221 254 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms