RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SERPINE3A8MV23 424 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 B4DXG7 233 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 FOXE1O00358 373 aaPredicted RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 ZSCAN12O43309 604 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 TIMM8AO60220 97 aaPredicted RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 IFNA14P01570 189 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 DCNP07585 359 aaKnown RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 STSP08842 583 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 RAB4AP20338 218 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 GSTM3P21266 225 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 ARL2P36404 184 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 KIR3DL2P43630 455 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 ARRB1P49407 418 aaPredicted RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 EFNA3P52797 238 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 CLDN18P56856 261 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 MRPS25P82663 173 aaKnown RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 CDK16Q00536 496 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 BST2Q10589 180 aaKnown RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 DOCK1Q14185 1865 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 TRIP10Q15642 601 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 PRR4Q16378 134 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 SGCAQ16586 387 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 C1orf220Q5T0J3 134 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 MEDAGQ5VYS4 303 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 TIGD3Q6B0B8 471 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 ZNF562Q6V9R5 426 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 CENPUQ71F23 418 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 ARCQ7LC44 396 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 PAGE2Q7Z2X7 111 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 PARGQ86W56 976 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 MCOLN2Q8IZK6 566 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 NRGNQ92686 78 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 MCHR2Q969V1 340 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 TM4SF19Q96DZ7 209 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 CCNL2Q96S94 520 aaPredicted RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 CIB1Q99828 191 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 SLC30A2Q9BRI3 323 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 PELOQ9BRX2 385 aaKnown RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 CENPKQ9BS16 269 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 MED10Q9BTT4 135 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 C20orf24Q9BUV8 137 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 TSSK1BQ9BXA7 367 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 C6orf62Q9GZU0 229 aaPredicted RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 ISG20L2Q9H9L3 353 aaKnown RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 ADAP2Q9NPF8 381 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 MRPL40Q9NQ50 206 aaKnown RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 UFSP2Q9NUQ7 469 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 ADA2Q9NZK5 511 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 CLEC2DQ9UHP7 191 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 BCAP29Q9UHQ4 241 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 ZNF490Q9ULM2 529 aaPredicted RBP3.57□□□□□ -1.84
NUP88-213ENST00000576862 TFR2Q9UP52 801 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 LRRC42Q9Y546 428 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 NPTNQ9Y639 398 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 MYH4Q9Y623 1939 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 WDR90Q96KV7 1748 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 UQCRHLA0A096LP55 91 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 IGKV6-21A0A0C4DH24 114 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 TMEM213A2RRL7 107 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 RAB19A4D1S5 217 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 METTL21EPA6NDL7 271 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 SMIM23A6NLE4 172 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 SGK494L7N484 410 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 WWP2O00308 870 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 NBR2O15453 112 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 IGHV3-23P01764 117 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 UQCRHP07919 91 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 KRT16P08779 473 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 CTXN2P0C2S0 81 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 CPN1P15169 458 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 UCHL3P15374 230 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 PCK1P35558 622 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 GCLMP48507 274 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 SERPINB9P50453 376 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 UBE2G2P60604 165 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 GNG11P61952 73 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 ADARB1P78563 741 aaKnown RBP3.56□□□□□ -1.84
NUP88-213ENST00000576862 MRPS6P82932 125 aaKnown RBP3.56□□□□□ -1.84
NUP88-213ENST00000576862 TSPAN31Q12999 210 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 SLAMF1Q13291 335 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 GANABQ14697 944 aaKnown RBP3.56□□□□□ -1.84
NUP88-213ENST00000576862 SNRNP35Q16560 246 aaKnown RBP3.56□□□□□ -1.84
NUP88-213ENST00000576862 EXOC3L4Q17RC7 722 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 BEND6Q5SZJ8 279 aaPredicted RBP3.56□□□□□ -1.84
NUP88-213ENST00000576862 RTL4Q6ZR62 310 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 NECAP1Q8NC96 275 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 TMEM104Q8NE00 496 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 C19orf18Q8NEA5 215 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 OR7G2Q8NG99 324 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 OR51L1Q8NGJ5 315 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 MARCH1Q8TCQ1 289 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 HTR3CQ8WXA8 447 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 ST8SIA1Q92185 356 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 ADIPOR1Q96A54 375 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 C18orf25Q96B23 403 aaPredicted RBP3.56□□□□□ -1.84
NUP88-213ENST00000576862 CCDC127Q96BQ5 260 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 SLC25A38Q96DW6 304 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 DUS3LQ96G46 650 aaKnown RBP3.56□□□□□ -1.84
NUP88-213ENST00000576862 C16orf74Q96GX8 76 aa3.56□□□□□ -1.84
NUP88-213ENST00000576862 LINC00167Q96N53 147 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms