RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SHISA9B4DS77 424 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 NPIPB4C9JG80 1138 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 H3BMQ9 156 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 CASKO14936 926 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 SURF4O15260 269 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 SLC16A7O60669 478 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 GABARAPO95166 117 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 DBTP11182 482 aaKnown RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 LAP3P28838 519 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 PCSK6P29122 969 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 C21orf33P30042 268 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 SSTR2P30874 369 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 SLC6A6P31641 620 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 GRK5P34947 590 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 TGFBR2P37173 567 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 MAP2K4P45985 399 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF133P52736 654 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 NUDT6P53370 316 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 PRPS1P60891 318 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF91Q05481 1191 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 HNRNPA0Q13151 305 aaKnown RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 LSAMPQ13449 338 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 CRMP1Q14194 572 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ENDOGQ14249 297 aaKnown RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 SGCAQ16586 387 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 MSMPQ1L6U9 139 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 BEX5Q5H9J7 111 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF362Q5T0B9 420 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 C10orf128Q5T292 105 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 AADACL4Q5VUY2 407 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ANKRD16Q6P6B7 361 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 DPY19L2P2Q6ZN68 376 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 BCDIN3DQ7Z5W3 292 aaKnown RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ANKRD13BQ86YJ7 626 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 CLVS1Q8IUQ0 354 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 LNX2Q8N448 690 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 SLC22A24Q8N4F4 322 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 TCEANCQ8N8B7 351 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 SLC37A3Q8NCC5 494 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 C1orf162Q8NEQ5 155 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 BBS1Q8NFJ9 593 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 OR52E2Q8NGJ4 325 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 TMEM163Q8TC26 289 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 HSD17B8Q92506 261 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 AKAP1Q92667 903 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 C12orf43Q96C57 262 aaKnown RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 FBXO17Q96EF6 278 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 LRR1Q96L50 414 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 Q96MT0 163 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 COG8Q96MW5 612 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF75AQ96N20 296 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF582Q96NG8 517 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 MYCBPQ99417 103 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 TMEM204Q9BSN7 226 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 PRRG3Q9BZD7 231 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 YIPF3Q9GZM5 350 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 OR51B6Q9H340 312 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 RPRD1BQ9NQG5 326 aaKnown RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 B3GNT2Q9NY97 397 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ENPP5Q9UJA9 477 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 MOKQ9UQ07 419 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 COA3Q9Y2R0 106 aaPredicted RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 LSM2Q9Y333 95 aaKnown RBP6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ITPR3Q14573 2671 aa6.87□□□□□ -1.31
CCDC40-215ENST00000576033 ARPC4-TTLL3A0A0A6YYG9 625 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 TVP23AA6NH52 213 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 E7EQL1 145 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 PRODHO43272 600 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 GPRIN2O60269 458 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 TXNDC12O95881 172 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 HMGN1P05114 100 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 LCKP06239 509 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 MMP7P09237 267 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 GAAP10253 952 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 PPP3CBP16298 524 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF14P17017 642 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF32P17041 273 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 CD40P25942 277 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 HOXC12P31275 282 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 CDH11P55287 796 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 SH3BGRP55822 239 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 UBE2NP61088 152 aaKnown RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ERVS71-1P61550 626 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ST3GAL4Q11206 333 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 DOC2BQ14184 412 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 CTF1Q16619 201 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ANKDD1AQ495B1 522 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 GPR107Q5VW38 600 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 CORO6Q6QEF8 472 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ABHD12BQ7Z5M8 362 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 ERI1Q8IV48 349 aaKnown RBP6.86□□□□□ -1.31
CCDC40-215ENST00000576033 LINC00346Q8IVM7 164 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 OR6V1Q8N148 313 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 C17orf78Q8N4C9 275 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 NPEPL1Q8NDH3 523 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 OR2T33Q8NG76 320 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 AKR7LQ8NHP1 331 aa6.86□□□□□ -1.31
CCDC40-215ENST00000576033 SMAP2Q8WU79 429 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms