RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 POLR1DQ9Y2S0 133 aa17.88■□□□□ 0.45
VPS53-210ENST00000571456 PLCE1Q9P212 2302 aa17.88■□□□□ 0.45
VPS53-210ENST00000571456 IGHV1-18A0A0C4DH31 117 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 E9PQ18 207 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 ABCD4O14678 606 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 SLC16A6O15403 523 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 SIAH2O43255 324 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 ZNF14P17017 642 aaPredicted RBP17.87■□□□□ 0.45
VPS53-210ENST00000571456 ZNF32P17041 273 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 LOXP28300 417 aaPredicted RBP17.87■□□□□ 0.45
VPS53-210ENST00000571456 PEX2P28328 305 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 EPHA2P29317 976 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 GGT2P36268 569 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 IDH3GP51553 393 aaPredicted RBP17.87■□□□□ 0.45
VPS53-210ENST00000571456 TUBA1BP68363 451 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 TUBA4AP68366 448 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 PIGFQ07326 219 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 KEAP1Q14145 624 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 ENDOGQ14249 297 aaKnown RBP17.87■□□□□ 0.45
VPS53-210ENST00000571456 TEX30Q5JUR7 227 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 PLBD1Q6P4A8 553 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 UNQ6126/PRO20091Q6UXV3 157 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 TUBA1AQ71U36 451 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 CPOQ8IVL8 374 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 GID4Q8IVV7 300 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 ZNF555Q8NEP9 628 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 OR4F15Q8NGB8 312 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 OR9Q1Q8NGQ5 310 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 FBXO17Q96EF6 278 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 ZNF75AQ96N20 296 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 PITX2Q99697 317 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 CDADC1Q9BWV3 514 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 OR2H1Q9GZK4 316 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 TOR3AQ9H497 397 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 HINT3Q9NQE9 182 aaKnown RBP17.87■□□□□ 0.45
VPS53-210ENST00000571456 IMPAD1Q9NX62 359 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 NDRG4Q9ULP0 352 aaKnown RBP17.87■□□□□ 0.45
VPS53-210ENST00000571456 SPEF1Q9Y4P9 236 aa17.87■□□□□ 0.45
VPS53-210ENST00000571456 ZNF503-AS2A6NEH8 195 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 SLC22A31A6NKX4 558 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 SNTNA6NMZ2 147 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 H0YJX3 145 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 SNAP29O95721 258 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 CECR9P0C854 216 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 NAAAQ02083 359 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 TMED1Q13445 227 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 TTC23Q5W5X9 447 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 ZNF704Q6ZNC4 412 aaPredicted RBP17.86■□□□□ 0.45
VPS53-210ENST00000571456 KRTAP1-3Q8IUG1 177 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 C1orf174Q8IYL3 243 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 OR2AJ1Q8NGZ0 328 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 RFKQ969G6 155 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 OTULINQ96BN8 352 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 MARCH7Q9H992 704 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 EMC7Q9NPA0 242 aa17.86■□□□□ 0.45
VPS53-210ENST00000571456 FAM183AA6NL82 134 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 TLX2O43763 284 aaPredicted RBP17.85■□□□□ 0.45
VPS53-210ENST00000571456 PRKYO43930 277 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 TFP02787 698 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 ROS1P08922 2347 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 SONP18583 2426 aaKnown RBP17.85■□□□□ 0.45
VPS53-210ENST00000571456 PYCR1P32322 319 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 APLNRP35414 380 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 POLR2IP36954 125 aaKnown RBP17.85■□□□□ 0.45
VPS53-210ENST00000571456 PCK2Q16822 640 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 TBC1D28Q2M2D7 210 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 PABPC1L2AQ5JQF8 200 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 SLC25A30Q5SVS4 291 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 LINC01590Q5TEZ4 76 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 MEDAGQ5VYS4 303 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 LPCAT4Q643R3 524 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 SHFQ7M4L6 423 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 TCEANCQ8N8B7 351 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 OR6K6Q8NGW6 343 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 C1QTNF6Q9BXI9 259 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 HDHD2Q9H0R4 259 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 OR51V1Q9H2C8 321 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 ASH2LQ9UBL3 628 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 CYB5R1Q9UHQ9 305 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 GMPPBQ9Y5P6 360 aa17.85■□□□□ 0.45
VPS53-210ENST00000571456 LOC100130705A0A1B0GUX0 176 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 VSTM5A8MXK1 200 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 SGCEO43556 437 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 SLC2A5P22732 501 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 GSTT1P30711 240 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 ENTPD1P49961 510 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 HIST1H3AP68431 136 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 PSG4Q00888 419 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 ECH1Q13011 328 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 IL18R1Q13478 541 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 RAB39AQ14964 217 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 RAB35Q15286 201 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 LRRC36Q1X8D7 754 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 ZIK1Q3SY52 487 aaPredicted RBP17.84■□□□□ 0.45
VPS53-210ENST00000571456 HIST2H3PS2Q5TEC6 136 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 SLC22A25Q6T423 547 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 UGT2A3Q6UWM9 527 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 HIST2H3AQ71DI3 136 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 RHOUQ7L0Q8 258 aa17.84■□□□□ 0.45
VPS53-210ENST00000571456 GALNT4Q8N4A0 578 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms