RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 GPR6P46095 362 aaPredicted RBP6.65□□□□□ -1.34
CDH3-209ENST00000569080 PCBD1P61457 104 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 LMO4P61968 165 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 PPP1CBP62140 327 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 LSM6P62312 80 aaKnown RBP6.65□□□□□ -1.34
CDH3-209ENST00000569080 HIST1H3AP68431 136 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 CCL8P80075 99 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SPIBQ01892 262 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SCRN3Q0VDG4 424 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 HNRNPA0Q13151 305 aaKnown RBP6.65□□□□□ -1.34
CDH3-209ENST00000569080 AQP6Q13520 282 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 KRT72Q14CN4 511 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 KCNMB1Q16558 191 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 CR1LQ2VPA4 569 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SPATS1Q496A3 300 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 CCDC92Q53HC0 331 aaPredicted RBP6.65□□□□□ -1.34
CDH3-209ENST00000569080 SPRNQ5BIV9 151 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 FAM209AQ5JX71 171 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 HIST2H3PS2Q5TEC6 136 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 ZNF770Q6IQ21 691 aaPredicted RBP6.65□□□□□ -1.34
CDH3-209ENST00000569080 PGBD2Q6P3X8 592 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SMARCD3Q6STE5 483 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 ZNF620Q6ZNG0 422 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 HIST2H3AQ71DI3 136 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 GLB1L2Q8IW92 636 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 PHC2Q8IXK0 858 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 LINC01356Q8N9X3 169 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 ICA1LQ8NDH6 482 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 OR4C15Q8NGM1 316 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 ABHD4Q8TB40 342 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SNX33Q8WV41 574 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SLC7A6Q92536 515 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 C4orf45Q96LM5 186 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 TSSK2Q96PF2 358 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 CDRT15Q96T59 188 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 BTBD10Q9BSF8 475 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 NDEL1Q9GZM8 345 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 NUAK2Q9H093 628 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 SHARPINQ9H0F6 387 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 KCNN2Q9H2S1 579 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 OR52D1Q9H346 318 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 ASH2LQ9UBL3 628 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 KLHL21Q9UJP4 597 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 NDRG4Q9ULP0 352 aaKnown RBP6.65□□□□□ -1.34
CDH3-209ENST00000569080 COA3Q9Y2R0 106 aaPredicted RBP6.65□□□□□ -1.34
CDH3-209ENST00000569080 IER3IP1Q9Y5U9 82 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 LYVE1Q9Y5Y7 322 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 LHFPL6Q9Y693 200 aa6.65□□□□□ -1.34
CDH3-209ENST00000569080 IGHV1-69-2A0A0G2JMI3 117 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 PHF1O43189 567 aaPredicted RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 SGCEO43556 437 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 CDC14BO60729 498 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 DEAF1O75398 565 aaPredicted RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 KHDRBS3O75525 346 aaKnown RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 UBOX5O94941 541 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ABHD16AO95870 558 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 TFP02787 698 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 FABP3P05413 133 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 CD55P08174 381 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 T-ENOLP0DO92 83 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 HIST1H1CP16403 213 aaKnown RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 SRD5A1P18405 259 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 CRYBB2P43320 205 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 HTR5AP47898 357 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ERFP50548 548 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ZNF81P51508 661 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 RPS6KA3P51812 740 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 HMGA2P52926 109 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 DVL1P1P54792 670 aaPredicted RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 TMEM33P57088 247 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 SELENOVP59797 346 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 PSG7Q13046 419 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 MEP1BQ16820 701 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 RFX4Q33E94 735 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 KRTAP27-1Q3LI81 207 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ZNF718Q3SXZ3 478 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 C1orf94Q6P1W5 598 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 TMEM154Q6P9G4 183 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 C16orf89Q6UX73 402 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 Q6ZR03 302 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 USP51Q70EK9 711 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 RRM2BQ7LG56 351 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ZBTB46Q86UZ6 589 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ZDHHC21Q8IVQ6 265 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 C1orf174Q8IYL3 243 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ALDH16A1Q8IZ83 802 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 OR6V1Q8N148 313 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 SLC26A10Q8NG04 563 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 OR9Q2Q8NGE9 314 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 OR8D4Q8NGM9 314 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 SPATA3Q8NHX4 192 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 CCT8L2Q96SF2 557 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 BEX2Q9BXY8 128 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 NARFLQ9H6Q4 476 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 SAP30LQ9HAJ7 183 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 KRCC1Q9NPI7 259 aaPredicted RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 TBCCD1Q9NVR7 557 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 NDE1Q9NXR1 346 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 VNN3Q9NY84 501 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 ACTR3BQ9P1U1 418 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms