RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 RAF1P04049 648 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 SP1P08047 785 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 CLEC2LP0C7M8 214 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 DCTDP32321 178 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 TNFSF8P32971 234 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 PSMB10P40306 273 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 GFRA1P56159 465 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 CARD18P57730 90 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 RPS11P62280 158 aaKnown RBP eCLIP12.97□□□□□ -0.33
COMMD4-221ENST00000567935 EIF2B1Q14232 305 aaKnown RBP12.97□□□□□ -0.33
COMMD4-221ENST00000567935 MEP1BQ16820 701 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 RGS21Q2M5E4 152 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
COMMD4-221ENST00000567935 ATP1A1-AS1Q5TC04 95 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 SPINK14Q6IE38 97 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 METAP1DQ6UB28 335 aaPredicted RBP12.97□□□□□ -0.33
COMMD4-221ENST00000567935 CREB3L2Q70SY1 520 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 OR9K2Q8NGE7 335 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 HAS2Q92819 552 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 RELTQ969Z4 430 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 CPNE4Q96A23 557 aaPredicted RBP12.97□□□□□ -0.33
COMMD4-221ENST00000567935 SIGLEC12Q96PQ1 595 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 ELOVL3Q9HB03 270 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 PAQR5Q9NXK6 330 aaPredicted RBP12.97□□□□□ -0.33
COMMD4-221ENST00000567935 SLCO1C1Q9NYB5 712 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 KIAA1549Q9HCM3 1950 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 CNTRLQ7Z7A1 2325 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
COMMD4-221ENST00000567935 HIVEP3Q5T1R4 2406 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 PDZD2O15018 2839 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 SHANK1Q9Y566 2161 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 ARGFXA6NJG6 315 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 OR4C45A6NMZ5 311 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 CTDSP2O14595 271 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 TNFSF11O14788 317 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 MAGEB4O15481 346 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-221ENST00000567935 SLC19A2O60779 497 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 UPK1BO75841 260 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 ZFPL1O95159 310 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 CSNK1A1P48729 337 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 SUCLG1P53597 346 aaKnown RBP12.96□□□□□ -0.33
COMMD4-221ENST00000567935 CLDN17P56750 224 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 FMODQ06828 376 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 ETFDHQ16134 617 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 BCL2A1Q16548 175 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 HSD17B12Q53GQ0 312 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 C10orf128Q5T292 105 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 LINC00696Q6ZRV3 163 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 GGNQ86UU5 652 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 SULF2Q8IWU5 870 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 PARP16Q8N5Y8 322 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 TMEM178AQ8NBL3 297 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 GPR148Q8TDV2 347 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 TMEM54Q969K7 222 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 RNF166Q96A37 237 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-221ENST00000567935 MAP6Q96JE9 813 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 ADGRG7Q96K78 797 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 C4orf45Q96LM5 186 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 MRI1Q9BV20 369 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 EMC6Q9BV81 110 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 SLITRK2Q9H156 845 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 NIPAL2Q9H841 368 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 GLTPQ9NZD2 209 aa12.96□□□□□ -0.33
COMMD4-221ENST00000567935 ERRFI1Q9UJM3 462 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-221ENST00000567935 HIVEP1P15822 2718 aa12.96□□□□□ -0.34
COMMD4-221ENST00000567935 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 TRBV5-5A0A0J9YX44 114 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 PINLYPA6NC86 204 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 EIF1AYO14602 144 aaKnown RBP12.95□□□□□ -0.34
COMMD4-221ENST00000567935 GPR171O14626 319 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 GLSO94925 669 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-221ENST00000567935 RPP14O95059 124 aaKnown RBP12.95□□□□□ -0.34
COMMD4-221ENST00000567935 GPANK1O95872 356 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 RFPL3SP0C7P2 107 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 RAB3BP20337 219 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 GUCA1AP43080 201 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-221ENST00000567935 NANOS3P60323 173 aaKnown RBP12.95□□□□□ -0.34
COMMD4-221ENST00000567935 MRPL49Q13405 166 aaKnown RBP12.95□□□□□ -0.34
COMMD4-221ENST00000567935 CAMK2DQ13557 499 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 INSL4Q14641 139 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 Q499Y3 187 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 WIPI1Q5MNZ9 446 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-221ENST00000567935 ABLIM2Q6H8Q1 611 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 FOXL2NBQ6ZUU3 175 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF676Q8N7Q3 588 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 ST7LQ8TDW4 575 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 C11orf40Q8WZ69 217 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 MCHR2Q969V1 340 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 SCMH1Q96GD3 660 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 ATF6BQ99941 703 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 PDCD1LG2Q9BQ51 273 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 C1orf198Q9H425 327 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 ZCCHC4Q9H5U6 513 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 FRRS1LQ9P0K9 344 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 CYB5R1Q9UHQ9 305 aa12.95□□□□□ -0.34
COMMD4-221ENST00000567935 SHISA3A0PJX4 238 aa12.94□□□□□ -0.34
COMMD4-221ENST00000567935 NOTOA8MTQ0 251 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms