RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 PCMT1P22061 227 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 SDHAP31040 664 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 MVKQ03426 396 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 SCRN3Q0VDG4 424 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 SPRNQ5BIV9 151 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 FGD3Q5JSP0 725 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 AVPI1Q5T686 147 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 GPR139Q6DWJ6 353 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 RINLQ6ZS11 566 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 PTCHD4Q6ZW05 846 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 RFLNBQ8N5W9 214 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 RNF148Q8N7C7 305 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 OR51F2Q8NH61 342 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 C19orf24Q9BVV8 132 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 NDEL1Q9GZM8 345 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 ZNF665Q9H7R5 613 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 ELOVL3Q9HB03 270 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 LPAR2Q9HBW0 351 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 TBCCD1Q9NVR7 557 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 HIF1ANQ9NWT6 349 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 ADA2Q9NZK5 511 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 CGGBP1Q9UFW8 167 aaPredicted RBP13.3□□□□□ -0.28
CDH3-204ENST00000565453 WIPI2Q9Y4P8 454 aa13.3□□□□□ -0.28
CDH3-204ENST00000565453 DOK2O60496 412 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 UBOX5O94941 541 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 TXNDC12O95881 172 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 CD55P08174 381 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 HSD17B1P14061 328 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 SRP14P37108 136 aaKnown RBP13.29□□□□□ -0.28
CDH3-204ENST00000565453 LIPAP38571 399 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 ARHGDIAP52565 204 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 PSG7Q13046 419 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 OTPQ5XKR4 325 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 DPY19L2P2Q6ZN68 376 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 VASH1Q7L8A9 365 aaPredicted RBP13.29□□□□□ -0.28
CDH3-204ENST00000565453 ELMOD3Q96FG2 381 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 LRRC37BQ96QE4 947 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 FAM107BQ9H098 131 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 SYT4Q9H2B2 425 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 G6PC2Q9NQR9 355 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 CYSLTR2Q9NS75 346 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 CD300AQ9UGN4 299 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 IL20RAQ9UHF4 553 aa13.29□□□□□ -0.28
CDH3-204ENST00000565453 COA3Q9Y2R0 106 aaPredicted RBP13.29□□□□□ -0.28
CDH3-204ENST00000565453 PLSCR5A0PG75 271 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 UNC119BA6NIH7 251 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 CLDN25C9JDP6 229 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 SOCS2O14508 198 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 TPD52L2O43399 206 aaKnown RBP13.28□□□□□ -0.28
CDH3-204ENST00000565453 SGCEO43556 437 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 SLC16A7O60669 478 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 KHDRBS3O75525 346 aaKnown RBP13.28□□□□□ -0.28
CDH3-204ENST00000565453 MPZL1O95297 269 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 ABHD16AO95870 558 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 IGHV2-5P01817 119 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 CDKN2AP42771 156 aaKnown RBP13.28□□□□□ -0.28
CDH3-204ENST00000565453 HTR5AP47898 357 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 LSM6P62312 80 aaKnown RBP13.28□□□□□ -0.28
CDH3-204ENST00000565453 CDK5R2Q13319 367 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 AQP6Q13520 282 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 KCNMB1Q16558 191 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 HFEQ30201 348 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 CCDC92Q53HC0 331 aaPredicted RBP13.28□□□□□ -0.28
CDH3-204ENST00000565453 MTX3Q5HYI7 312 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 ZER1Q7Z7L7 766 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 ADCK1Q86TW2 530 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 NPEPL1Q8NDH3 523 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 OR52J3Q8NH60 311 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 PYURFQ96I23 114 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 NUAK2Q9H093 628 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 MSL2Q9HCI7 577 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 AURKCQ9UQB9 309 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 GRIP1Q9Y3R0 1128 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 IER3IP1Q9Y5U9 82 aa13.28□□□□□ -0.28
CDH3-204ENST00000565453 TANC2Q9HCD6 1990 aa13.27□□□□□ -0.28
CDH3-204ENST00000565453 TRAV20A0A0B4J274 112 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 OR6C6A6NF89 314 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 KITLGP21583 273 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 TUBG1P23258 451 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 SMARCD3Q6STE5 483 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 ARL9Q6T311 187 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 C1orf229Q6ZS94 237 aaPredicted RBP13.27□□□□□ -0.29
CDH3-204ENST00000565453 GLB1L2Q8IW92 636 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 PGAM4Q8N0Y7 254 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 SLC7A6Q92536 515 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 RAB39BQ96DA2 213 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 DIRC2Q96SL1 478 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 EGLN1Q9GZT9 426 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 NSRP1Q9H0G5 558 aaKnown RBP13.27□□□□□ -0.29
CDH3-204ENST00000565453 KRCC1Q9NPI7 259 aaPredicted RBP13.27□□□□□ -0.29
CDH3-204ENST00000565453 TUBG2Q9NRH3 451 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 ASH2LQ9UBL3 628 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 PURGQ9UJV8 347 aaKnown RBP13.27□□□□□ -0.29
CDH3-204ENST00000565453 ZDHHC8Q9ULC8 765 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 STARD10Q9Y365 291 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 V9GYQ6 96 aa13.27□□□□□ -0.29
CDH3-204ENST00000565453 DCTN6O00399 190 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 TCF21O43680 179 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 PLPP2O43688 288 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 GMNNO75496 209 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms