RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 BTNL3Q6UXE8 466 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 LRRN1Q6UXK5 716 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 LRRC74BQ6ZQY2 392 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 RNF165Q6ZSG1 346 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 H1FNTQ75WM6 255 aaPredicted RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 PIWIL3Q7Z3Z3 882 aaKnown RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 ANKRD46Q86W74 232 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 LRRC28Q86X40 367 aaPredicted RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 SNX32Q86XE0 403 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 VRK2Q86Y07 508 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 ANKRD13BQ86YJ7 626 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 PEX5LQ8IYB4 626 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZNF440Q8IYI8 595 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC22A24Q8N4F4 322 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 AGR3Q8TD06 166 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 ACMSDQ8TDX5 336 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 IFT81Q8WYA0 676 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 SGCDQ92629 289 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 DYRK2Q92630 601 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 TAAR8Q969N4 342 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC47A1Q96FL8 570 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 THOC1Q96FV9 657 aaKnown RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 MARS2Q96GW9 593 aaKnown RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 FAM71F1Q96KD3 344 aaPredicted RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 LRR1Q96L50 414 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 C3orf30Q96M34 536 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 TRNT1Q96Q11 434 aaKnown RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 MECRQ9BV79 373 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 PTDSS2Q9BVG9 487 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 LRMDAQ9H2I8 198 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 RNF121Q9H920 327 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 NANOGQ9H9S0 305 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 DCAF16Q9NXF7 216 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 MARCOQ9UEW3 520 aaPredicted RBP4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 TBK1Q9UHD2 729 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 IL20RAQ9UHF4 553 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 GPR45Q9Y5Y3 372 aa4.3□□□□□ -1.72
TUBGCP4-209ENST00000564511 PRSS51A0A1B0GVH4 220 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 IQCMA0A1B0GVH7 501 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 A0A1W2PPM1 405 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZSCAN5BA6NJL1 495 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 A8MXK9 166 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 MS4A18H0YCH9 400 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TM9SF1O15321 606 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 GPR137BO60478 399 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 PLIN3O60664 434 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 SERPINI2O75830 405 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZFPL1O95159 310 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 SNAP29O95721 258 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 HPRP00739 348 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 PTHP01270 115 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 OPN1MWP04001 364 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 CHRNGP07510 517 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 MELTFP08582 738 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 FGF4P08620 206 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 OPN1MW2P0DN77 364 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 OPN1MW3P0DN78 364 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 NR2F1P10589 423 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 G6PDP11413 515 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 CCNOP22674 350 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ARRB2P32121 409 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 CCT5P48643 541 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 CLDN8P56748 225 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 KRTAP10-11P60412 298 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 RPL15P61313 204 aaKnown RBP4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 HOXC5Q00444 222 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 MALLQ13021 153 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZMYND11Q15326 602 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TBC1D28Q2M2D7 210 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 MS4A18Q3C1V0 323 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TMEM155Q4W5P6 130 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 CCDC92Q53HC0 331 aaPredicted RBP4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 SPRNQ5BIV9 151 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TTMPQ5BVD1 217 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 GPR157Q5UAW9 335 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 RUSC1-AS1Q66K80 236 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 C11orf87Q6NUJ2 197 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 C8orf74Q6P047 294 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TMEM53Q6P2H8 277 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZNF836Q6ZNA1 936 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 NET1Q7Z628 596 aaPredicted RBP4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ZBTB46Q86UZ6 589 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 C10orf107Q8IVU9 208 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 C1orf174Q8IYL3 243 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TMEM86BQ8N661 226 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 OR8J2Q8NGG1 315 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 OR1J2Q8NGS2 313 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 OR52P1PQ8NH57 321 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 TBC1D15Q8TC07 691 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 SSMEM1Q8WWF3 244 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 IPCEF1Q8WWN9 437 aaPredicted RBP4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 RAB40AQ8WXH6 277 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 FMO2Q99518 471 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 AIFM2Q9BRQ8 373 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 SLC35A5Q9BS91 424 aa4.29□□□□□ -1.72
TUBGCP4-209ENST00000564511 ADI1Q9BV57 179 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms