RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	GJD4	Q96KN9	370 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ADGRL4	Q9HBW9	690 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	KNG1	P01042	644 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	NUP43	Q8NFH3	380 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF461	Q8TAF7	563 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	SMO	Q99835	787 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	A4GNT	Q9UNA3	340 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	GPR31	O00270	319 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CCL22	O00626	93 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC25A1	P53007	311 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	NFATC4	Q14934	902 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM234	Q8WY98	164 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	F7	P08709	466 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	HKR1	P10072	659 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	SRP14	P37108	136 aa	Known RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	FAM3B	P58499	235 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CSNK2A1	P68400	391 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	IAH1	Q2TAA2	248 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CSNK2A3	Q8NEV1	391 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	OR4K13	Q8NH42	304 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	MRGPRX4	Q96LA9	322 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	FOXN4	Q96NZ1	517 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	PIPOX	Q9P0Z9	390 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	UPK3BL1	B0FP48	263 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	UPK3BL2	E5RIL1	263 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CD14	P08571	375 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	HSD11B2	P80365	405 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	DGCR2	P98153	550 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	EXT1	Q16394	746 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	LRRC18	Q8N456	261 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	TM4SF18	Q96CE8	201 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CMC2	Q9NRP2	79 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CLDN16	Q9Y5I7	305 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	KLF2	Q9Y5W3	355 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	MTCH2	Q9Y6C9	303 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	GREM1	O60565	184 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	GNG10	P50151	68 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF551	Q7Z340	670 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	MYPOP	Q86VE0	399 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CERS5	Q8N5B7	392 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	LCOR	Q96JN0	433 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF552	Q9H707	407 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	IGLON5	A6NGN9	336 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF878	C9JN71	531 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CCNO	P22674	350 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	DTYMK	P23919	212 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	FCAR	P24071	287 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF85	Q03923	595 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	SERINC2	Q96SA4	455 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	TRAPPC1	Q9Y5R8	145 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	DLEC1	Q9Y238	1755 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	TTC28	Q96AY4	2481 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	DCDC2B	A2VCK2	349 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	FURIN	P09958	794 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	AADAC	P22760	399 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	BMI1	P35226	326 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	MELK	Q14680	651 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	LMF2	Q9BU23	707 aa	Known RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	H2BFM	P0C1H6	154 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	NPPB	P16860	134 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	CLECL1	Q8IZS7	167 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	DOK5	Q9P104	306 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	FBXO4	Q9UKT5	387 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF593	O00488	134 aa	Predicted RBP	3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	TBL1X	O60907	577 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	NDUFS6	O75380	124 aa	Known RBP	3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	WNT1	P04628	370 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	NKG7	Q16617	165 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	OR10C1	Q96KK4	312 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	YARS2	Q9Y2Z4	477 aa	Known RBP	3.89	□□□□□ -1.79
MACF1-231	ENST00000564288		A0A1B0GV90	55 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	CNMD	O75829	334 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	RECK	O95980	971 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	OR10J4	P0C629	311 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	OR8U8	P0C7N1	319 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	RPS4Y1	P22090	263 aa	Known RBP	3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	ARL4D	P49703	201 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	TAF1C	Q15572	869 aa	Predicted RBP	3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	RTL8B	Q17RB0	113 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	LAIR2	Q6ISS4	152 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	ALKAL1	Q6UXT8	129 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	SLC36A1	Q7Z2H8	476 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	OR9A4	Q8NGU2	314 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	OR8U1	Q8NH10	309 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	PMCHL2	Q9BQD1	86 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	B3GALT5	Q9Y2C3	310 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	CHST2	Q9Y4C5	530 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	CTNS	O60931	367 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	ANKRD34C	P0C6C1	535 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	CCKBR	P32239	447 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	TMPPE	Q6ZT21	453 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	OR51A4	Q8NGJ6	313 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF563	Q8TA94	476 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	SELENOP	P49908	381 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	HERPUD1	Q15011	391 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	CMKLR1	Q99788	373 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	PCCB	P05166	539 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	ENPP2	Q13822	863 aa		3.89	□□□□□ -1.79
MACF1-231	ENST00000564288	FZD2	Q14332	565 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms