RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PCBD1P61457 104 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 ERVS71-1P61550 626 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 TEKQ02763 1124 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 HSF2Q03933 536 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 PLP2Q04941 152 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 GINS1Q14691 196 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 TBC1D28Q2M2D7 210 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 RSPO1Q2MKA7 263 aaPredicted RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 TMEM255AQ5JRV8 349 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 LINC01590Q5TEZ4 76 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 TMEM236Q5W0B7 351 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 KDM4DQ6B0I6 523 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 DNM1P34Q6PK57 102 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 LYPD4Q6UWN0 246 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 PRSS57Q6UWY2 283 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 DNM1P46Q6ZS02 220 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 YTHDF3Q7Z739 585 aaKnown RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 LRP11Q86VZ4 500 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 ZNF101Q8IZC7 436 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 ATG16L2Q8NAA4 619 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 OR51L1Q8NGJ5 315 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 OR9Q1Q8NGQ5 310 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 TEX47Q8TBZ9 253 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 PTP4A1Q93096 173 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 MRPL24Q96A35 216 aaKnown RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 PKP2Q99959 881 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 MRPL37Q9BZE1 423 aaKnown RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 GABARAPL1Q9H0R8 117 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 SEMA6AQ9H2E6 1030 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 KCNN2Q9H2S1 579 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 C1orf198Q9H425 327 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 MED20Q9H944 212 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 DLL4Q9NR61 685 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 CMC2Q9NRP2 79 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 MYEF2Q9P2K5 600 aaKnown RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 ASH2LQ9UBL3 628 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 TMEFF2Q9UIK5 374 aaPredicted RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 KLHL21Q9UJP4 597 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 FZR1Q9UM11 496 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 ARID1AO14497 2285 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 RTTNQ86VV8 2226 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 ACANP16112 2415 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 C5orf49A4QMS7 147 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 TVP23AA6NH52 213 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 FAM183AA6NL82 134 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 G3V2T6 193 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 H3BN98 237 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SURF4O15260 269 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SYNGR3O43761 229 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 NGFP01138 241 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 PTHP01270 115 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 COX5BP10606 129 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 FCGR1AP12314 374 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SPI1P17947 270 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 POU1F1P28069 291 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 APLNRP35414 380 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 GUCA1AP43080 201 aaPredicted RBP7.34□□□□□ -1.23
UBR1-204ENST00000563239 CENPAP49450 140 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 CRISP1P54107 249 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 UCP2P55851 309 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 GLO1Q04760 184 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SCRN3Q0VDG4 424 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 AQP6Q13520 282 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 PCK2Q16822 640 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 KRTAP27-1Q3LI81 207 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SHEQ5VZ18 495 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SLC18B1Q6NT16 456 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SLC27A4Q6P1M0 643 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 CORO6Q6QEF8 472 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 CFAP77Q6ZQR2 320 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.34□□□□□ -1.23
UBR1-204ENST00000563239 HIPK1Q86Z02 1210 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 PARP8Q8N3A8 854 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SVOPLQ8N434 492 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 OR10S1Q8NGN2 331 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 OR1J2Q8NGS2 313 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 OR1F12Q8NHA8 337 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SLC7A6Q92536 515 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 CENPNQ96H22 339 aaPredicted RBP7.34□□□□□ -1.23
UBR1-204ENST00000563239 BDH2Q9BUT1 245 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 OR51B6Q9H340 312 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 ZNF556Q9HAH1 456 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 CDH20Q9HBT6 801 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SLC25A19Q9HC21 320 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 PNRC2Q9NPJ4 139 aaKnown RBP7.34□□□□□ -1.23
UBR1-204ENST00000563239 PAPOLBQ9NRJ5 636 aaKnown RBP7.34□□□□□ -1.23
UBR1-204ENST00000563239 CYB5R1Q9UHQ9 305 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 CMAHPQ9Y471 501 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 SPEF1Q9Y4P9 236 aa7.34□□□□□ -1.23
UBR1-204ENST00000563239 ARFGEF3Q5TH69 2177 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 IGLV3-9A0A075B6K5 115 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 TRIM64A6NGJ6 449 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 TRIM64BA6NI03 449 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 RIIAD1A6NNX1 92 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 SGCEO43556 437 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 DOK2O60496 412 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 LY6HO94772 140 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 CLPTM1O96005 669 aa7.33□□□□□ -1.24
UBR1-204ENST00000563239 IFNGP01579 166 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms