RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 HIST1H1BP16401 226 aaKnown RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 CD72P21854 359 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 F2RP25116 425 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 HMGB2P26583 209 aaKnown RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 GDF1P27539 372 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 ARL4AP40617 200 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 CTSKP43235 329 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 HTR5AP47898 357 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 PRLHRP49683 370 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 ATP4BP51164 291 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 CAV2P51636 162 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 TDGF1P3P51864 188 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 NXPH1P58417 271 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 OR2B8PP59922 312 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 ERVFRD-1P60508 538 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 RRAS2P62070 204 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 POLR2LP62875 67 aaKnown RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 EMX1Q04741 257 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 HSPB3Q12988 150 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 TEAD2Q15562 447 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 SYPL1Q16563 259 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 TBR1Q16650 682 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 PLPPR5Q32ZL2 321 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 CEACAM21Q3KPI0 293 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 DCAF4L1Q3SXM0 396 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 FAM174BQ3ZCQ3 159 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 SOWAHCQ53LP3 525 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 TMEM196Q5HYL7 178 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 ATAD3CQ5T2N8 411 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 FAM71F2Q6NXP2 309 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 HAGHLQ6PII5 290 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 PLXDC2Q6UX71 529 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 COX15Q7KZN9 410 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 OLIG3Q7RTU3 272 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 CMC1Q7Z7K0 106 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 NLGN4XQ8N0W4 816 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 FGFRL1Q8N441 504 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 SYT8Q8NBV8 401 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 REPS2Q8NFH8 660 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 SLC26A10Q8NG04 563 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 OR1L6Q8NGR2 347 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 OR2Y1Q8NGV0 311 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 OR6N2Q8NGY6 317 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 ZFP90Q8TF47 636 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 JSRP1Q96MG2 331 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 ARHGDIGQ99819 225 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 PAAF1Q9BRP4 392 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 AMBRA1Q9C0C7 1298 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 CHRNA10Q9GZZ6 450 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 DCSTAMPQ9H295 470 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 CLMPQ9H6B4 373 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 REEP4Q9H6H4 257 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 ALG9Q9H6U8 611 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 NIPAL2Q9H841 368 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 NMRAL1Q9HBL8 299 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 DUS2Q9NX74 493 aaKnown RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 P2RX2Q9UBL9 471 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 METTL1Q9UBP6 276 aaKnown RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 FBXL4Q9UKA2 621 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 PACSIN3Q9UKS6 424 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 SH2B3Q9UQQ2 575 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 B3GALT5Q9Y2C3 310 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 COA3Q9Y2R0 106 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-211ENST00000562199 SLC6A5Q9Y345 797 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 AP4S1Q9Y587 144 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 MTCH2Q9Y6C9 303 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 V9GYY9 64 aa4.92□□□□□ -1.62
CAPN3-211ENST00000562199 COL11A1P12107 1806 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 KIR2DL5BA0A0G2JN68 375 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 KIR2DL5BA0A0G2JPC4 375 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 IGSF23A1L1A6 192 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 A6NNC1 897 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 HSPB2A8KAH6 182 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 F5H5T6 163 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 H3BMQ9 156 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TRAPPC2LH3BP13 241 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 M0R143 59 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 SLC31A1O15431 190 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 MFSD11O43934 449 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 HPGDSO60760 199 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RFPL2O75678 378 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 MPZL1O95297 269 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 FARS2O95363 451 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 JCHAINP01591 159 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 MT-ND4P03905 459 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ARG1P05089 322 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ISG15P05161 165 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CD1AP06126 327 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CD3EP07766 207 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CHRM4P08173 479 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ZNF30P17039 623 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CELP19835 753 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CBLP22681 906 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 OMGP23515 440 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 SRD5A2P31213 254 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CDAP32320 146 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TNFRSF4P43489 277 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 SIRPAP78324 504 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms