RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 OGFRL1Q5TC84 451 aaPredicted RBP8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 AADACL4Q5VUY2 407 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 SLC18B1Q6NT16 456 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 PLBD1Q6P4A8 553 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 PAMR1Q6UXH9 720 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 B3GLCTQ6Y288 498 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 RHOUQ7L0Q8 258 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 DTX2Q86UW9 622 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 C1orf174Q8IYL3 243 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 PIAS4Q8N2W9 510 aaPredicted RBP8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 SLC30A7Q8NEW0 376 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 PROKR2Q8NFJ6 384 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 OR9Q1Q8NGQ5 310 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 TMEM163Q8TC26 289 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 IPCEF1Q8WWN9 437 aaPredicted RBP8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 MBD6Q96DN6 1003 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 PLEKHA8Q96JA3 519 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 FOXN4Q96NZ1 517 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 DHRS9Q9BPW9 319 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 KCNS3Q9BQ31 491 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 LIME1Q9H400 295 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF442Q9H7R0 627 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 ASH2LQ9UBL3 628 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 ST6GALNAC2Q9UJ37 374 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 NDRG4Q9ULP0 352 aaKnown RBP8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 COMMD3-BMI1R4GMX3 469 aa8.33□□□□□ -1.08
RABGGTA-221ENST00000561055 USF3Q68DE3 2245 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 OR6C6A6NF89 314 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 FAM171A2A8MVW0 826 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 ATE1O95260 518 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 RAF1P04049 648 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 GYPBP06028 91 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 PAX1P15863 534 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF823P16415 610 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 CD53P19397 219 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TUBG1P23258 451 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 APEX1P27695 318 aaKnown RBP8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 APOBEC3AP31941 199 aaPredicted RBP8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TTKP33981 857 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 APLNRP35414 380 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 GLRXP35754 106 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 ENTPD1P49961 510 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 CDH11P55287 796 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 RIPK1Q13546 671 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 RAB35Q15286 201 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 MEP1BQ16820 701 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TBC1D28Q2M2D7 210 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 KRTAP27-1Q3LI81 207 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 SLC25A30Q5SVS4 291 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 NXNL2Q5VZ03 156 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF774Q6NX45 483 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 VASH1Q7L8A9 365 aaPredicted RBP8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 CXXC5Q7LFL8 322 aaKnown RBP8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TIGD4Q8IY51 512 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TCEANCQ8N8B7 351 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF511Q8NB15 262 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 OR10H5Q8NGA6 315 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 OR51L1Q8NGJ5 315 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 OR8J1Q8NGP2 316 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 AKR7LQ8NHP1 331 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 SMAP2Q8WU79 429 aaPredicted RBP8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 NEUROG1Q92886 237 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 PIGTQ969N2 578 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 DCLRE1CQ96SD1 692 aaKnown RBP8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TEAD3Q99594 435 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 PITX2Q99697 317 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 COQ7Q99807 217 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 HDHD2Q9H0R4 259 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TOR3AQ9H497 397 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 RIBC2Q9H4K1 309 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 MED20Q9H944 212 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 TUBG2Q9NRH3 451 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 FAIMQ9NVQ4 179 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 HAO2Q9NYQ3 351 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 SPEF1Q9Y4P9 236 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 ATP23Q9Y6H3 246 aa8.32□□□□□ -1.08
RABGGTA-221ENST00000561055 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 CCDC182A6NF36 153 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 VSTM5A8MXK1 200 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 J3QW42 95 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 OVOL3O00110 214 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 RER1O15258 196 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 TLX2O43763 284 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 DOK2O60496 412 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 CD8AP01732 235 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 HLA-DQA2P01906 255 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 GSTT1P30711 240 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 OTX1P32242 354 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 RAD52P43351 418 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 EVX1P49640 407 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 GDI2P50395 445 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 UCP2P55851 309 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 CDC42P60953 191 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 SNRPGP62308 76 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 ADAM8P78325 824 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 SLC34A1Q06495 639 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 ECH1Q13011 328 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 TMED1Q13445 227 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 KEAP1Q14145 624 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 GGTLC2Q14390 218 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms