RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 OR52E2Q8NGJ4 325 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 OR4K13Q8NH42 304 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 IPCEF1Q8WWN9 437 aaPredicted RBP12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 AKAP1Q92667 903 aaKnown RBP eCLIP12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF75AQ96N20 296 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 NMNAT3Q96T66 252 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 YIPF3Q9GZM5 350 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 NUAK2Q9H093 628 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 RNF121Q9H920 327 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 SEC61A2Q9H9S3 476 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 POLE4Q9NR33 117 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 KCNG2Q9UJ96 466 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 POU2F3Q9UKI9 436 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 SPEF1Q9Y4P9 236 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 TIMM10BQ9Y5J6 103 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 MAST4O15021 2626 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 IQCMA0A1B0GVH7 501 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 A0A1W2PPL8 197 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 A0A1W2PPR1 153 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 H7C1C5 153 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 MPZL2O60487 215 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 SOX14O95416 240 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 MMP7P09237 267 aaPredicted RBP12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 PAICSP22234 425 aaKnown RBP12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 IDH3GP51553 393 aaPredicted RBP12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC25A1P53007 311 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 CDH11P55287 796 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 SNRPGP62308 76 aaKnown RBP12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 LCN6P62502 163 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 CDK5Q00535 292 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 SCRN3Q0VDG4 424 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 AQP6Q13520 282 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 SGCAQ16586 387 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 NPEPL1Q8NDH3 523 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 OR13F1Q8NGS4 319 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 MUL1Q969V5 352 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 SH3GL3Q99963 347 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 RHNO1Q9BSD3 238 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 C1QTNF6Q9BXI9 259 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC25A19Q9HC21 320 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 PSORS1C1Q9UIG5 152 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 ATPIF1Q9UII2 106 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 B9D1Q9UPM9 204 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 NAV2Q8IVL1 2488 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 DCHS2Q6V1P9 2916 aa12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 RAI1Q7Z5J4 1906 aaPredicted RBP12.15□□□□□ -0.46
PKNOX1-209ENST00000560448 VGLL3A8MV65 326 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF701M0R085 212 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 M0R129 80 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 MT-ND2P03891 347 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 COX5BP10606 129 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 BMP4P12644 408 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 POU1F1P28069 291 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 CDAP32320 146 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 TUBA1BP68363 451 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 EFNB1P98172 346 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 HSF2Q03933 536 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 EMX1Q04741 257 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF362Q5T0B9 420 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 TUBA1AQ71U36 451 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 PRSS48Q7RTY5 328 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 OR6V1Q8N148 313 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF540Q8NDQ6 660 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 SDR9C7Q8NEX9 313 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 KBTBD8Q8NFY9 601 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 GGHQ92820 318 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 DDOQ99489 341 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 DHRS9Q9BPW9 319 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF442Q9H7R0 627 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 VCX3AQ9NNX9 186 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 RPRD1BQ9NQG5 326 aaKnown RBP12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 BEX4Q9NWD9 120 aaPredicted RBP12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 RSL24D1Q9UHA3 163 aaKnown RBP12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 SNX5Q9Y5X3 404 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 FBN2P35556 2912 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 PRR14LQ5THK1 2151 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 CENPEQ02224 2701 aa12.14□□□□□ -0.47
PKNOX1-209ENST00000560448 APCP25054 2843 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 IGLV1-36A0A0B4J1U3 117 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 OR6C68A6NDL8 312 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF503-AS2A6NEH8 195 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 RGS10O43665 173 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 ATE1O95260 518 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 DCKP27707 260 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 GSTT1P30711 240 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 RPS23P62266 143 aaKnown RBP12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 GALK2Q01415 458 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 GINS1Q14691 196 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 SLC35F1Q5T1Q4 408 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 LRRC18Q8N456 261 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 SLC37A3Q8NCC5 494 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 LILRB1Q8NHL6 650 aaPredicted RBP12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 SMAP2Q8WU79 429 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms