RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 MUL1Q969V5 352 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 NMD3Q96D46 503 aaKnown RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 MSI2Q96DH6 328 aaKnown RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 OR2M2Q96R28 347 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 ZNF587Q96SQ5 575 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 RSPO3Q9BXY4 272 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 NDEL1Q9GZM8 345 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 CHODLQ9H9P2 273 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 CRLF2Q9HC73 371 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 B3GAT2Q9NPZ5 323 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 PSORS1C1Q9UIG5 152 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 RPL36Q9Y3U8 105 aaKnown RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 CDH10Q9Y6N8 788 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 UNC119BA6NIH7 251 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 SEC14L2O76054 403 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 PIPP12273 146 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-214ENST00000560402 DCKP27707 260 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 GRPRP30550 384 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 GIPRP48546 466 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 HOXC5Q00444 222 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 HGFACQ04756 655 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 PMS2P3Q13401 168 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 TBCEQ15813 527 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-214ENST00000560402 OCLNQ16625 522 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 FAM120AOSQ5T036 256 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 LAIR2Q6ISS4 152 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 ZNF627Q7L945 461 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 ERI1Q8IV48 349 aaKnown RBP11.73□□□□□ -0.53
SMAD3-214ENST00000560402 UEVLDQ8IX04 471 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 NRMQ8IXM6 262 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 KDM8Q8N371 416 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 SCAIQ8N9R8 606 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 APH1BQ8WW43 257 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 RFKQ969G6 155 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 TAAR8Q969N4 342 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 FAM46AQ96IP4 442 aaKnown RBP11.73□□□□□ -0.53
SMAD3-214ENST00000560402 LRR1Q96L50 414 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 FOXN4Q96NZ1 517 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 ASPNQ9BXN1 380 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 RACGAP1Q9H0H5 632 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 SEC61A2Q9H9S3 476 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 ERVK-18Q9QC07 812 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 SEC14L4Q9UDX3 406 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 FBXL3Q9UKT7 428 aa11.73□□□□□ -0.53
SMAD3-214ENST00000560402 IGKV1D-42A0A075B6H8 117 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 SLC35F4A4IF30 521 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 H3BSA7 217 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 AHCYL1O43865 530 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 FADS2O95864 444 aaKnown RBP11.72□□□□□ -0.53
SMAD3-214ENST00000560402 MT-ND2P03891 347 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 CDK1P06493 297 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 CELA3BP08861 270 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 TACSTD2P09758 323 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 DAOP14920 347 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 GABRB1P18505 474 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 HTR2AP28223 471 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 THBS4P35443 961 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 OMPP47874 163 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 EVX1P49640 407 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 SNTB2Q13425 540 aaKnown RBP11.72□□□□□ -0.53
SMAD3-214ENST00000560402 SNAPC1Q16533 368 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 KRTAP24-1Q3LI83 254 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 SLC25A30Q5SVS4 291 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 GPR107Q5VW38 600 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 MYPOPQ86VE0 399 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-214ENST00000560402 NKAIN4Q8IVV8 208 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 ARIH2OSQ8N7S6 290 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 OR2T33Q8NG76 320 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 HPS1Q92902 700 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 TMIGD2Q96BF3 282 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 ISOC1Q96CN7 298 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 DOK1Q99704 481 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 NOX3Q9HBY0 568 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 TVP23BQ9NYZ1 205 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 BAIAP2Q9UQB8 552 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 NOX1Q9Y5S8 564 aa11.72□□□□□ -0.53
SMAD3-214ENST00000560402 A0A087WUJ7 227 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 A0A0B4J2E0 115 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 A0A1B0GX12 115 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 EFCAB9A8MZ26 197 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 TGFAP01135 160 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 IFI30P13284 250 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 PCMT1P22061 227 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 PSMB9P28065 219 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 GPR4P46093 362 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 CAPZA2P47755 286 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 RPS23P62266 143 aaKnown RBP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 CDK5Q00535 292 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 EMX1Q04741 257 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 PRKCDQ05655 676 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 SMN1Q16637 294 aaKnown RBP11.71□□□□□ -0.53
SMAD3-214ENST00000560402 GSG1Q2KHT4 349 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 KLHL22Q53GT1 634 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 TMEM236Q5W0B7 351 aa11.71□□□□□ -0.53
SMAD3-214ENST00000560402 XAF1Q6GPH4 301 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms