RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 MRM3Q9HC36 420 aaKnown RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 OR2S2Q9NQN1 319 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 NECAP2Q9NVZ3 263 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 CALYQ9NYX4 217 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 CLEC2DQ9UHP7 191 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 MRM2Q9UI43 246 aaKnown RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 SBNO1A3KN83 1393 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 LRPPRCP42704 1394 aaKnown RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 MSH6P52701 1360 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 IGHV3OR16-13A0A075B7E8 117 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 IGHV7-81A0A0B4J1V7 117 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 ZNF816-ZNF321PA0A0X1KG74 233 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 A0A1B0GW55 424 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 MGAT4DA6NG13 374 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 RSPH10B2B2RC85 870 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 H0Y9J4 135 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 TNFSF11O14788 317 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 RAD51BO15315 384 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 ERI3O43414 337 aaKnown RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 FKBP6O75344 327 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 SC5DO75845 299 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 TDP2O95551 362 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 RSPH10BP0C881 870 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 DUX4L2P0CJ85 424 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 DUX4L3P0CJ86 424 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 DUX4L5P0CJ88 424 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 DUX4L6P0CJ89 424 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 DUX4L7P0CJ90 424 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 ATP6V1B2P21281 511 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 ZBTB25P24278 435 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 CXCR2P25025 360 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 AK4P27144 223 aaPredicted RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 PCK1P35558 622 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 ARR3P36575 388 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 KLK7P49862 253 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 SUB1P53999 127 aaKnown RBP eCLIP2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR2B6P58173 313 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 TAS2R39P59534 338 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 CTAG1AP78358 180 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 SLC35B1P78383 322 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 IGLV3-21P80748 117 aaPredicted RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 SLC25A11Q02978 314 aaKnown RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 BCL2L1Q07817 233 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 PDIA2Q13087 525 aaKnown RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 MAPRE2Q15555 327 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 PRR4Q16378 134 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR2B11Q5JQS5 317 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 PTRHD1Q6GMV3 140 aaKnown RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 DUX4L9Q6RFH8 374 aaPredicted RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 WDR82Q6UXN9 313 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 UNQ9370/PRO34162Q6UXP9 181 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 VKORC1L1Q8N0U8 176 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 C6orf223Q8N319 242 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 CYB561A3Q8NBI2 242 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR2AP1Q8NGE2 309 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR51S1Q8NGJ8 323 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR6T1Q8NGN1 323 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR2A1Q8NGT9 310 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR6K2Q8NGY2 324 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR8D1Q8WZ84 308 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 TMEM54Q969K7 222 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 EEF1AKMT3Q96AZ1 226 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 SLC25A38Q96DW6 304 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR5B12Q96R08 314 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 OR5M11Q96RB7 305 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 MCCC1Q96RQ3 725 aaPredicted RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 GPR21Q99679 349 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 FOXC2Q99958 501 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 SH3GL3Q99963 347 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 MED10Q9BTT4 135 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 NKIRAS1Q9NYS0 192 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 TREM2Q9NZC2 230 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 ARMCX1Q9P291 453 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 SLC17A7Q9P2U7 560 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 DUX4Q9UBX2 424 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 FADS3Q9Y5Q0 445 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 PUS1Q9Y606 427 aaKnown RBP eCLIP2.67□□□□□ -1.98
SPG11-218ENST00000559754 UNC13AQ9UPW8 1703 aa2.67□□□□□ -1.98
SPG11-218ENST00000559754 USP42Q9H9J4 1324 aaKnown RBP2.67□□□□□ -1.98
SPG11-218ENST00000559754 BRD4O60885 1362 aaPredicted RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 A0A1B0GTI1 187 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 PSMB11A5LHX3 300 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 A6NDN8 102 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 A6NIZ1 184 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 ZNF726A6NNF4 738 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 HACD1B0YJ81 288 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 F8VP50 259 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 MKRN2OSH3BPM6 223 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 GOLGA8RI6L899 631 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 K7N7A8 449 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 TOR1AO14656 332 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 ITGB1BP1O14713 200 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 EMC8O43402 210 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 DUSP14O95147 198 aaKnown RBP2.66□□□□□ -1.98
SPG11-218ENST00000559754 KLHL2O95198 593 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 OXTP01178 125 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 HPNP05981 417 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 RHOCP08134 193 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 OR8U8P0C7N1 319 aa2.66□□□□□ -1.98
SPG11-218ENST00000559754 PGAM2P15259 253 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms