RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MOV10Q9HCE1 1003 aaKnown RBP13.05□□□□□ -0.32
VPS18-202ENST00000558474 OBP2BQ9NPH6 170 aa13.05□□□□□ -0.32
VPS18-202ENST00000558474 BABAM2Q9NXR7 383 aa13.05□□□□□ -0.32
VPS18-202ENST00000558474 GALNT8Q9NY28 637 aa13.05□□□□□ -0.32
VPS18-202ENST00000558474 JKAMPQ9P055 326 aa13.05□□□□□ -0.32
VPS18-202ENST00000558474 ASH2LQ9UBL3 628 aa13.05□□□□□ -0.32
VPS18-202ENST00000558474 ATPIF1Q9UII2 106 aa13.05□□□□□ -0.32
VPS18-202ENST00000558474 GDF2Q9UK05 429 aaPredicted RBP13.05□□□□□ -0.32
VPS18-202ENST00000558474 TIMM10BQ9Y5J6 103 aa13.05□□□□□ -0.32
VPS18-202ENST00000558474 FREM1Q5H8C1 2179 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 A8MXE2 369 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 ZNF878C9JN71 531 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 UBL3O95164 117 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 ARR3P36575 388 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 MAP2K4P45985 399 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 TLE1Q04724 770 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 ECH1Q13011 328 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 MLLT11Q13015 90 aaPredicted RBP13.04□□□□□ -0.32
VPS18-202ENST00000558474 GPR50Q13585 617 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 MED22Q15528 200 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 NEDD8Q15843 81 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 GABRA6Q16445 453 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 CCDC58Q4VC31 144 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 SFRP5Q5T4F7 317 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 KLHL24Q6TFL4 600 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 VASH1Q7L8A9 365 aaPredicted RBP13.04□□□□□ -0.32
VPS18-202ENST00000558474 SSX8Q7RTT4 187 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 SSX6Q7RTT6 188 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.04□□□□□ -0.32
VPS18-202ENST00000558474 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 LRRC18Q8N456 261 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 ASB5Q8WWX0 329 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 SLAMF6Q96DU3 332 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 HDHD2Q9H0R4 259 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 OPN3Q9H1Y3 402 aaPredicted RBP13.04□□□□□ -0.32
VPS18-202ENST00000558474 TRIM36Q9NQ86 728 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 DDX28Q9NUL7 540 aaKnown RBP13.04□□□□□ -0.32
VPS18-202ENST00000558474 SH3BGRL2Q9UJC5 107 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 FBXL3Q9UKT7 428 aa13.04□□□□□ -0.32
VPS18-202ENST00000558474 INTS1Q8N201 2190 aaKnown RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 ARPC4-TTLL3A0A0A6YYG9 625 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 CIB4A0PJX0 185 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 APOC1P02654 83 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 COX5BP10606 129 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 PSKH1P11801 424 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 PSMB1P20618 241 aaKnown RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 BMP5P22003 454 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 CHRNB4P30926 498 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 OPRL1P41146 370 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 RPS27P42677 84 aaKnown RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 TGM4P49221 684 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 GBX2P52951 348 aaPredicted RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 FOXG1P55316 489 aaPredicted RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 GRB2P62993 217 aaKnown RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 MRPL49Q13405 166 aaKnown RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 RAB35Q15286 201 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 C4orf17Q53FE4 359 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 ELFN2Q5R3F8 820 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 ZNF544Q6NX49 715 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 KRT77Q7Z794 578 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 P2RY8Q86VZ1 359 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 SMAP2Q8WU79 429 aaPredicted RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 SPRYD4Q8WW59 207 aaPredicted RBP13.03□□□□□ -0.32
VPS18-202ENST00000558474 FBXO17Q96EF6 278 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 MAP6Q96JE9 813 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 C4orf36Q96KX1 117 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 MGLLQ99685 303 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 COQ3Q9NZJ6 369 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 KLHDC2Q9Y2U9 406 aa13.03□□□□□ -0.32
VPS18-202ENST00000558474 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
VPS18-202ENST00000558474 J3QLW9 94 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 ABHD16AO95870 558 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 CD1AP06126 327 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 LCKP06239 509 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 MMP7P09237 267 aaPredicted RBP13.02□□□□□ -0.33
VPS18-202ENST00000558474 H2BFMP0C1H6 154 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 ZNF19P17023 458 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 CD53P19397 219 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 HOXC12P31275 282 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 RIDAP52758 137 aaKnown RBP13.02□□□□□ -0.33
VPS18-202ENST00000558474 OR12D2P58182 307 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 TIGD6Q17RP2 521 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 TBRG1Q3YBR2 411 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 OR2G6Q5TZ20 316 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 FDX2Q6P4F2 183 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 ZNF474Q6S9Z5 364 aaPredicted RBP13.02□□□□□ -0.33
VPS18-202ENST00000558474 CXorf67Q86X51 503 aaPredicted RBP13.02□□□□□ -0.33
VPS18-202ENST00000558474 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.02□□□□□ -0.33
VPS18-202ENST00000558474 ALDH16A1Q8IZ83 802 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 RFLNBQ8N5W9 214 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 GATAD2BQ8WXI9 593 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 BBC3Q96PG8 261 aaPredicted RBP13.02□□□□□ -0.33
VPS18-202ENST00000558474 OR5M11Q96RB7 305 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 COQ7Q99807 217 aa13.02□□□□□ -0.33
VPS18-202ENST00000558474 ELOVL3Q9HB03 270 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms