RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 C5orf34Q96MH7 638 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 AMELYQ99218 206 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR11A1Q9GZK7 315 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR10A4Q9H209 315 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SLCO5A1Q9H2Y9 848 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 MOB1AQ9H8S9 216 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SCPEP1Q9HB40 452 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 NOX3Q9HBY0 568 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SLC22A11Q9NSA0 550 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 NKIRAS2Q9NYR9 191 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 KLRF1Q9NZS2 232 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 MRPL15Q9P015 296 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 UPB1Q9UBR1 384 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 KLK11Q9UBX7 282 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 COA3Q9Y2R0 106 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 TRBV23-1A0A0A0MS06 115 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 A0A1B0GTH9 108 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 A6NL46 340 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ADAM10O14672 748 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SRSF10O75494 262 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SCGNO76038 276 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 GPANK1O95872 356 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 IFNA7P01567 189 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 H2BFMP0C1H6 154 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 NR2C1P13056 603 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 IGFBP3P17936 291 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 CXCL3P19876 107 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 HTR2CP28335 458 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 PRSS3P35030 304 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 RPS27P42677 84 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 PER3P56645 1201 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SNRPD2P62316 118 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 HSF1Q00613 529 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 C19orf57Q0VDD7 668 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 FOXF1Q12946 379 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 LINC00303Q3SY05 128 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ZBTB37Q5TC79 503 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF626Q68DY1 528 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SFRP4Q6FHJ7 346 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 FAM166AQ6J272 317 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SLC25A25Q6KCM7 469 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 C3orf33Q6P1S2 294 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 MTFR2Q6P444 385 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 KLHL24Q6TFL4 600 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SEZ6L2Q6UXD5 910 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 CPEB2Q7Z5Q1 589 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ADGRE4PQ86SQ3 457 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR51D1Q8NGF3 324 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR8H1Q8NGG4 311 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR51A4Q8NGJ6 313 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SLC25A43Q8WUT9 341 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ASB5Q8WWX0 329 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 GCDHQ92947 438 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR6C1Q96RD1 312 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ULBP3Q9BZM4 244 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SLC26A1Q9H2B4 701 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 MGAT4CQ9UBM8 478 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 NXT1Q9UKK6 140 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR52A1Q9UKL2 312 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ELF5Q9UKW6 265 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 A0A087WV48 116 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 TMEM272A0A1B0GTI8 110 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 LOC107986453A0A1B0GWG9 222 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 TUBAL3A6NHL2 446 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 LIPT2A6NK58 231 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 C17orf51A8MQB3 221 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 MS4A18H0YCH9 400 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 AKR7A2O43488 359 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 NOS1APO75052 506 aaPredicted RBP6.5□□□□□ -1.37
VPS13C-206ENST00000558338 ALDOBP05062 364 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 LPLP06858 475 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 ITGA5P08648 1049 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 JMJD7P0C870 316 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 CD37P11049 281 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 GABRA1P14867 456 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 RAB6AP20340 208 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 TAS2R19P59542 299 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 DHODHQ02127 395 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 POU3F1Q03052 451 aaPredicted RBP6.5□□□□□ -1.37
VPS13C-206ENST00000558338 MFGE8Q08431 387 aaPredicted RBP6.5□□□□□ -1.37
VPS13C-206ENST00000558338 CAMK2DQ13557 499 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 SHBQ15464 509 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 ODF4Q2M2E3 257 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 MS4A18Q3C1V0 323 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 C2orf76Q3KRA6 126 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 TRIM61Q5EBN2 209 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 RAB12Q6IQ22 244 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 TMEM205Q6UW68 189 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 SHISA6Q6ZSJ9 500 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.5□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF295-AS1Q8N0V1 137 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 OR1J4Q8NGS1 313 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 OR2T35Q8NGX2 323 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 OR6N1Q8NGY5 312 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 CCDC107Q8WV48 283 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 RNF133Q8WVZ7 376 aa6.5□□□□□ -1.37
VPS13C-206ENST00000558338 ATOH1Q92858 354 aaPredicted RBP6.5□□□□□ -1.37
VPS13C-206ENST00000558338 SLC25A44Q96H78 314 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms