RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CALCBP10092 127 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 DNASE1L1P49184 302 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 PRKXP51817 358 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 GPR85P60893 370 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 GFOD2Q3B7J2 385 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 C2orf76Q3KRA6 126 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 GLYATL3Q5SZD4 288 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 FADS6Q8N9I5 356 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 OR1J4Q8NGS1 313 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 UCN2Q96RP3 112 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 SOX7Q9BT81 388 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 ZNF700Q9H0M5 742 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 PROK2Q9HC23 129 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 IGLV3-32A0A0A0MS00 114 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 ETV2O00321 342 aaPredicted RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 DHFRP00374 187 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 RAF1P04049 648 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 PGA4P0DJD7 388 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 PGA3P0DJD8 388 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 ZNF43P17038 809 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 CXCL3P19876 107 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 TCN2P20062 427 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 SSR4P51571 173 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 CCR9P51686 369 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 CLDN17P56750 224 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 RAB11BQ15907 218 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 SLC25A53Q5H9E4 307 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 TMEM53Q6P2H8 277 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 FDX2Q6P4F2 183 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 TIPARPQ7Z3E1 657 aaKnown RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 RPS19BP1Q86WX3 136 aaKnown RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 ZNF454Q8N9F8 522 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 NOXO1Q8NFA2 376 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 OR11H7Q8NGC8 314 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 NKD1Q969G9 470 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 FAM3DQ96BQ1 224 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 MRPL13Q9BYD1 178 aaKnown RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 MED28Q9H204 178 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 HPF1Q9NWY4 346 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 ASH2LQ9UBL3 628 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 ELF5Q9UKW6 265 aaPredicted RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 LOXL2Q9Y4K0 774 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 TRAV18A0A075B6X5 111 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 A0A1W2PNV4 684 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 A0A1W2PQ72 361 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 LNP1A1A4G5 178 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 CENPBD1B2RD01 187 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 GABARAPH6UMI1 98 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 RER1O15258 196 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 AKR7A2O43488 359 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 H2AFB2P0C5Z0 115 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 CSRP1P21291 193 aaKnown RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 GNALP38405 381 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 VEGFCP49767 419 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 RSPO4Q2I0M5 234 aaPredicted RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 OPN5Q6U736 354 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 BAIAP2L2Q6UXY1 529 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 LUZP2Q86TE4 346 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 COMMD2Q86X83 199 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 DTWD2Q8NBA8 298 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 OR6S1Q8NH40 331 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 FGGYQ96C11 551 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 C20orf85Q9H1P6 137 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 ATG5Q9H1Y0 275 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 ING3Q9NXR8 418 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 NUBP2Q9Y5Y2 271 aa9.39□□□□□ -0.91
TPM1-210ENST00000558264 MRPS18BQ9Y676 258 aaKnown RBP9.39□□□□□ -0.91
TPM1-210ENST00000558264 CTDSPLO15194 276 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 CTAG2O75638 210 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 IGHG1P01857 330 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 HPXP02790 462 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 ALDOBP05062 364 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 CD2P06729 351 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 YES1P07947 543 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 QDPRP09417 244 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 RAB40ALP0C0E4 278 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 LAP3P28838 519 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 Q0VFX4 171 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 TRA2AQ13595 282 aaKnown RBP eCLIP9.38□□□□□ -0.91
TPM1-210ENST00000558264 EXT1Q16394 746 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 ST3GAL2Q16842 350 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 NHLRC1Q6VVB1 395 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 BPHLQ86WA6 291 aaPredicted RBP9.38□□□□□ -0.91
TPM1-210ENST00000558264 OR4D10Q8NGI6 311 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 RAB40AQ8WXH6 277 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 SPACA5Q96QH8 159 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 GHITMQ9H3K2 345 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 CKLFQ9UBR5 152 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 CYB5R1Q9UHQ9 305 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 GDF2Q9UK05 429 aaPredicted RBP9.38□□□□□ -0.91
TPM1-210ENST00000558264 DKKL1Q9UK85 242 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 HHLA2Q9UM44 414 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 LHFPL6Q9Y693 200 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 TMEM272A0A1B0GTI8 110 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 OR2M5A3KFT3 312 aa9.38□□□□□ -0.91
TPM1-210ENST00000558264 ARPC1BO15143 372 aaKnown RBP9.38□□□□□ -0.91
TPM1-210ENST00000558264 GLSO94925 669 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms