RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SPARTQ8N0X7 666 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 ZNF433Q8N7K0 673 aaPredicted RBP10.89□□□□□ -0.67
TPM1-209ENST00000558072 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 OR52N5Q8NH56 324 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 RORBQ92753 470 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 BCL2L2Q92843 193 aaPredicted RBP10.89□□□□□ -0.67
TPM1-209ENST00000558072 NABP1Q96AH0 204 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 MUCL1Q96DR8 90 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 ALG8Q9BVK2 526 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 ZNF416Q9BWM5 594 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 HDHD2Q9H0R4 259 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 RNF121Q9H920 327 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 JKAMPQ9P055 326 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 ERVK-18Q9QC07 812 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 SLC5A6Q9Y289 635 aa10.89□□□□□ -0.67
TPM1-209ENST00000558072 ARPC4-TTLL3A0A0A6YYG9 625 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 IQCMA0A1B0GVH7 501 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 A0A1W2PQL4 384 aaPredicted RBP10.88□□□□□ -0.67
TPM1-209ENST00000558072 METTL15A6NJ78 407 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ACOD1A6NK06 481 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 TRIM64CA6NLI5 447 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 C16orf97H3BN30 126 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 LRRTM2O43300 516 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ITGA5P08648 1049 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 IGHV1-2P23083 117 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 C21orf33P30042 268 aaPredicted RBP10.88□□□□□ -0.67
TPM1-209ENST00000558072 CD79BP40259 229 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 RIDAP52758 137 aaKnown RBP10.88□□□□□ -0.67
TPM1-209ENST00000558072 ACSM1Q08AH1 577 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 IRF3Q14653 427 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 RAB35Q15286 201 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 SPHARQ15513 63 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 FBXL19-AS1Q494R0 122 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 CDONQ4KMG0 1287 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 CCDC58Q4VC31 144 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 TIMM23BQ5SRD1 257 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 DCXRQ7Z4W1 244 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ZNF808Q8N4W9 903 aaPredicted RBP10.88□□□□□ -0.67
TPM1-209ENST00000558072 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 IL17RDQ8NFM7 739 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 OR1J2Q8NGS2 313 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 LILRB4Q8NHJ6 448 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 CA5BP1Q8WTZ4 195 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ZNRF4Q8WWF5 429 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ITFG2Q969R8 447 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 SPTSSAQ969W0 71 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 SIGLEC11Q96RL6 698 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ABHD6Q9BV23 337 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 OPN3Q9H1Y3 402 aaPredicted RBP10.88□□□□□ -0.67
TPM1-209ENST00000558072 KCNJ16Q9NPI9 418 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ACOT13Q9NPJ3 140 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 TRIM36Q9NQ86 728 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 PAK1IP1Q9NWT1 392 aaPredicted RBP10.88□□□□□ -0.67
TPM1-209ENST00000558072 ASH2LQ9UBL3 628 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 GDF2Q9UK05 429 aaPredicted RBP10.88□□□□□ -0.67
TPM1-209ENST00000558072 IKZF2Q9UKS7 526 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 KALRNO60229 2985 aa10.88□□□□□ -0.67
TPM1-209ENST00000558072 ESPL1Q14674 2120 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 OR6C6A6NF89 314 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 SGCEO43556 437 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 MPZL1O95297 269 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 MT-ND2P03891 347 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 H2BFMP0C1H6 154 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 RNF224P0DH78 156 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 JUNBP17275 347 aaPredicted RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 HSD11B1P28845 292 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 RPL5P46777 297 aaKnown RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 HIST1H3AP68431 136 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 EMX1Q04741 257 aaPredicted RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 GPR50Q13585 617 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 ENDOGQ14249 297 aaKnown RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 CDSNQ15517 529 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 GABRA6Q16445 453 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 GSG1Q2KHT4 349 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 ZNF829Q3KNS6 432 aaPredicted RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 ELFN2Q5R3F8 820 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 HIST2H3PS2Q5TEC6 136 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 TMEM154Q6P9G4 183 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 ARL9Q6T311 187 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 B3GLCTQ6Y288 498 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 KCTD8Q6ZWB6 473 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 HIST2H3AQ71DI3 136 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 LINGO2Q7L985 606 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 LUZP2Q86TE4 346 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 LHFPL3Q86UP9 236 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 CXorf67Q86X51 503 aaPredicted RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 LRRC18Q8N456 261 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 RNF133Q8WVZ7 376 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 HSD17B8Q92506 261 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 SLAMF6Q96DU3 332 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 OR8B4Q96RC9 309 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 DCLRE1CQ96SD1 692 aaKnown RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 COQ7Q99807 217 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 MOB1AQ9H8S9 216 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 EMC7Q9NPA0 242 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 NGBQ9NPG2 151 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 BABAM2Q9NXR7 383 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms