RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 PRSS37A4D1T9 235 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 CDC42EP2O14613 210 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 SGCEO43556 437 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 AHCYL1O43865 530 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 RGS9O75916 674 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-235ENST00000557740 EPHA1P21709 976 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 HTR5AP47898 357 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 NUDT2P50583 147 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 MESTQ5EB52 335 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 MTX3Q5HYI7 312 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 TMEM255AQ5JRV8 349 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 DCAF12L2Q5VW00 463 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-235ENST00000557740 SEMA6DQ8NFY4 1073 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 Q96M85 177 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 WACQ9BTA9 647 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 EFCAB1Q9HAE3 211 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 NMNAT1Q9HAN9 279 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-235ENST00000557740 MSL2Q9HCI7 577 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 UBAP1Q9NZ09 502 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
SHMT2-235ENST00000557740 ENPP4Q9Y6X5 453 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 TEX13CA0A0J9YWL9 993 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 J3QLI3 93 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 PRSS23O95084 383 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 VENTXO95231 258 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 H1F0P07305 194 aaKnown RBP12.41□□□□□ -0.42
SHMT2-235ENST00000557740 COX5BP10606 129 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 NCK1P16333 377 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 TNFSF4P23510 183 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 ACTG1P63261 375 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 TNFAIP6P98066 277 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-235ENST00000557740 KRR1Q13601 381 aaKnown RBP12.41□□□□□ -0.42
SHMT2-235ENST00000557740 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 TMPRSS11FQ6ZWK6 438 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 ZFAND2BQ8WV99 257 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 FAM46AQ96IP4 442 aaKnown RBP12.41□□□□□ -0.42
SHMT2-235ENST00000557740 RERGLQ9H628 205 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 KRCC1Q9NPI7 259 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-235ENST00000557740 ZNF446Q9NWS9 450 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 RPS6KA6Q9UK32 745 aa12.41□□□□□ -0.42
SHMT2-235ENST00000557740 UBOX5O94941 541 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 NDUFB2O95178 105 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 SCG5P05408 212 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 CD55P08174 381 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 CTLA4P16410 223 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 TUBG1P23258 451 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 SDHAP31040 664 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 AQP6Q13520 282 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 GPR139Q6DWJ6 353 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 C12orf54Q6X4T0 127 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 VASH1Q7L8A9 365 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-235ENST00000557740 FAM122BQ7Z309 247 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 C1QL2Q7Z5L3 287 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 ADCK1Q86TW2 530 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 SLC7A13Q8TCU3 470 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 ST7LQ8TDW4 575 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 RASD2Q96D21 266 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 RSRC1Q96IZ7 334 aaKnown RBP12.4□□□□□ -0.42
SHMT2-235ENST00000557740 COG8Q96MW5 612 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 TMPRSS13Q9BYE2 586 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 SYT4Q9H2B2 425 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 TUBG2Q9NRH3 451 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 TBCCD1Q9NVR7 557 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 PLEK2Q9NYT0 353 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 POLR1DQ9Y2S0 133 aa12.4□□□□□ -0.42
SHMT2-235ENST00000557740 A0A1W2PRQ8 180 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 SLC16A7O60669 478 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 GMNNO75496 209 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 KHDRBS3O75525 346 aaKnown RBP12.39□□□□□ -0.43
SHMT2-235ENST00000557740 ZNF26P17031 533 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-235ENST00000557740 GATA3P23771 443 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 MDH1P40925 334 aaKnown RBP12.39□□□□□ -0.43
SHMT2-235ENST00000557740 PSG7Q13046 419 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 DGCR6Q14129 220 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 C1orf94Q6P1W5 598 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 C8orf82Q6P1X6 216 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-235ENST00000557740 C1orf229Q6ZS94 237 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-235ENST00000557740 TREML1Q86YW5 311 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 GLB1L2Q8IW92 636 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 OR2Z1Q8NG97 314 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 JMJD8Q96S16 334 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 ASH2LQ9UBL3 628 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 PURGQ9UJV8 347 aaKnown RBP12.39□□□□□ -0.43
SHMT2-235ENST00000557740 PCDHB10Q9UN67 800 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 AURKCQ9UQB9 309 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 SIGLEC7Q9Y286 467 aa12.39□□□□□ -0.43
SHMT2-235ENST00000557740 TRIM77I1YAP6 450 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 SOCS2O14508 198 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 AVPP01185 164 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 RHCEP18577 417 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 ADRA2CP18825 462 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 TNFRSF1AP19438 455 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 LIMS1P48059 325 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 HILS1P60008 231 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 PSME3P61289 254 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 LCN2P80188 198 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 CDK5R2Q13319 367 aa12.38□□□□□ -0.43
SHMT2-235ENST00000557740 KRT72Q14CN4 511 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms