RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 PLGP00747 810 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 HLA-DQA2P01906 255 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 TCRBP04435 133 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 CLEC2LP0C7M8 214 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 IFNGR1P15260 489 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 ALOX5APP20292 161 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 RAB3AP20336 220 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 MMP15P51511 669 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 RPS18P62269 152 aaKnown RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 LCN6P62502 163 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 ACSM3Q53FZ2 586 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 TEX30Q5JUR7 227 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 THEM4Q5T1C6 240 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 TFAP2EQ6VUC0 442 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 CEACAM19Q7Z692 300 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 SPICQ8N5J4 248 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF511Q8NB15 262 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 ZNRF4Q8WWF5 429 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 KCNE4Q8WWG9 221 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 FER1L6-AS2Q96M78 137 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 OXGR1Q96P68 337 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 TSSK2Q96PF2 358 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 OR5B2Q96R09 309 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 NAA11Q9BSU3 229 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 COMMD4Q9H0A8 199 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 KLHL9Q9P2J3 617 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 EXTL2Q9UBQ6 330 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 FBXO9Q9UK97 447 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 SIRT4Q9Y6E7 314 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-229ENST00000557348 PIEZO1Q92508 2521 aa11.32□□□□□ -0.6
SHMT2-229ENST00000557348 AQP7P3A6NL99 342 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 TMEM212A6NML5 194 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 E9PI62 339 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 SULT2B1O00204 365 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 DCTN6O00399 190 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 PDCD5O14737 125 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 TNFSF15O95150 251 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 UBL3O95164 117 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 CPN1P15169 458 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF823P16415 610 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 NUP62P37198 522 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-229ENST00000557348 GPR85P60893 370 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 ROM1Q03395 351 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 AIMP2Q13155 320 aaKnown RBP11.31□□□□□ -0.6
SHMT2-229ENST00000557348 P2RY14Q15391 338 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 NHLRC3Q5JS37 347 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 FDX2Q6P4F2 183 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 TMPPEQ6ZT21 453 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 SYT14Q8NB59 555 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 C15orf40Q8WUR7 153 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 DNTTIP1Q9H147 329 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-229ENST00000557348 RDH8Q9NYR8 311 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 ABRACLQ9P1F3 81 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 KCNG2Q9UJ96 466 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF222Q9UK12 451 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF175Q9Y473 711 aa11.31□□□□□ -0.6
SHMT2-229ENST00000557348 KLF2Q9Y5W3 355 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-229ENST00000557348 EFNA2O43921 213 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF254O75437 659 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 B3GALNT1O75752 331 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 AQP8O94778 261 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 AKR7A3O95154 331 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ECDO95905 644 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 IGHG1P01857 330 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 UCHL1P09936 223 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 CCR9P51686 369 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 HCCSP53701 268 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 AP3S2P59780 193 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 RAC1P63000 192 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ALKBH1Q13686 389 aaKnown RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 LGALSLQ3ZCW2 172 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ABHD17BQ5VST6 288 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 METTL11BQ5VVY1 283 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 RAET1LQ5VY80 246 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 TMEM225Q6GV28 225 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 DEGS2Q6QHC5 323 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 UTS2BQ765I0 119 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 DPY19L4Q7Z388 723 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 TMPRSS12Q86WS5 348 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF679Q8IYX0 411 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 OR11H7Q8NGC8 314 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 OR6X1Q8NH79 312 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 WACQ9BTA9 647 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 SLCO1C1Q9NYB5 712 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 KLHL13Q9P2N7 655 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 IKZF2Q9UKS7 526 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 MFSD2BA6NFX1 497 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 FAM171A2A8MVW0 826 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 A8MXK9 166 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF593O00488 134 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 GPR171O14626 319 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ABCD4O14678 606 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 TSC22D2O75157 780 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms