RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZNF418Q8TF45 676 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-220ENST00000556433 DIRC2Q96SL1 478 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 NDEL1Q9GZM8 345 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 ANKRD19PQ9H560 264 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 TMEM5Q9Y2B1 443 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 ENPP4Q9Y6X5 453 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 A0A0G2JMP0 313 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 A0A0X1KG70 313 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 ISPDA4D126 451 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 PRSS37A4D1T9 235 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 RGS9O75916 674 aaPredicted RBP19.15■□□□□ 0.66
ACTN1-220ENST00000556433 COX5BP10606 129 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 NCK1P16333 377 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 SCRN3Q0VDG4 424 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 PSG7Q13046 419 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 SPRNQ5BIV9 151 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 MESTQ5EB52 335 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 ZMAT1Q5H9K5 638 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 ZER1Q7Z7L7 766 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 PEG10Q86TG7 708 aaKnown RBP19.15■□□□□ 0.66
ACTN1-220ENST00000556433 OR4M2Q8NGB6 313 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 SLC7A13Q8TCU3 470 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 FAM46AQ96IP4 442 aaKnown RBP19.15■□□□□ 0.66
ACTN1-220ENST00000556433 ZNF570Q96NI8 536 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 KCTD14Q9BQ13 255 aaPredicted RBP19.15■□□□□ 0.66
ACTN1-220ENST00000556433 TMPRSS13Q9BYE2 586 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 TBCCD1Q9NVR7 557 aa19.15■□□□□ 0.66
ACTN1-220ENST00000556433 NDUFAB1O14561 156 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 SGCEO43556 437 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 DOK2O60496 412 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 PTP4A3O75365 173 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 CD55P08174 381 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 GSTM3P21266 225 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 HTR5AP47898 357 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 NUDT2P50583 147 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 TNFAIP6P98066 277 aaPredicted RBP19.14■□□□□ 0.65
ACTN1-220ENST00000556433 HSP90B2PQ58FF3 399 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 DCAF12L2Q5VW00 463 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 HACD2Q6Y1H2 254 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 FAM122BQ7Z309 247 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 TREML1Q86YW5 311 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 SEMA6DQ8NFY4 1073 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 ZFAND2BQ8WV99 257 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 POFUT1Q9H488 388 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 RERGLQ9H628 205 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 UBAP1Q9NZ09 502 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 FAM32AQ9Y421 112 aaKnown RBP19.14■□□□□ 0.65
ACTN1-220ENST00000556433 ANK2Q01484 3957 aa19.14■□□□□ 0.65
ACTN1-220ENST00000556433 WNK2Q9Y3S1 2297 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 TEX13CA0A0J9YWL9 993 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 SLC16A7O60669 478 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 NDUFB2O95178 105 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 H1F0P07305 194 aaKnown RBP19.13■□□□□ 0.65
ACTN1-220ENST00000556433 CTLA4P16410 223 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 EPHA1P21709 976 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 TUBG1P23258 451 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 MDH1P40925 334 aaKnown RBP19.13■□□□□ 0.65
ACTN1-220ENST00000556433 CDK5R2Q13319 367 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 C12orf54Q6X4T0 127 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 VASH1Q7L8A9 365 aaPredicted RBP19.13■□□□□ 0.65
ACTN1-220ENST00000556433 NPEPL1Q8NDH3 523 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 RASD2Q96D21 266 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 DCLRE1CQ96SD1 692 aaKnown RBP19.13■□□□□ 0.65
ACTN1-220ENST00000556433 TUBG2Q9NRH3 451 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 RPS6KA6Q9UK32 745 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 PCDHB10Q9UN67 800 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 STARD10Q9Y365 291 aa19.13■□□□□ 0.65
ACTN1-220ENST00000556433 A0A1W2PRQ8 180 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 J3QLI3 93 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 KHDRBS3O75525 346 aaKnown RBP19.12■□□□□ 0.65
ACTN1-220ENST00000556433 PSME3P61289 254 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 KRR1Q13601 381 aaKnown RBP19.12■□□□□ 0.65
ACTN1-220ENST00000556433 DGCR6Q14129 220 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 FGD3Q5JSP0 725 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 OTPQ5XKR4 325 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 GPR139Q6DWJ6 353 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 CMBLQ96DG6 245 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 NRIP3Q9NQ35 241 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 PLEK2Q9NYT0 353 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 PURGQ9UJV8 347 aaKnown RBP19.12■□□□□ 0.65
ACTN1-220ENST00000556433 SIGLEC7Q9Y286 467 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 COA3Q9Y2R0 106 aaPredicted RBP19.12■□□□□ 0.65
ACTN1-220ENST00000556433 NPTNQ9Y639 398 aa19.12■□□□□ 0.65
ACTN1-220ENST00000556433 NBEAL1Q6ZS30 2694 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 SBK2P0C263 348 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 ADRA2CP18825 462 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 TNFSF4P23510 183 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 SDHAP31040 664 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 LCN2P80188 198 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 HNRNPA0Q13151 305 aaKnown RBP19.11■□□□□ 0.65
ACTN1-220ENST00000556433 AQP6Q13520 282 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 C1orf94Q6P1W5 598 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 C1QL2Q7Z5L3 287 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 GLB1L2Q8IW92 636 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 OR2Z1Q8NG97 314 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 ST7LQ8TDW4 575 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 SLC7A6Q92536 515 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 SYT4Q9H2B2 425 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 C7orf69Q9H7B7 122 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 DCAF16Q9NXF7 216 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms