RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 NRIP3Q9NQ35 241 aa20.86■□□□□ 0.93
PRKCH-216ENST00000555542 ARL8BQ9NVJ2 186 aa20.86■□□□□ 0.93
PRKCH-216ENST00000555542 NDE1Q9NXR1 346 aa20.86■□□□□ 0.93
PRKCH-216ENST00000555542 TMEFF2Q9UIK5 374 aaPredicted RBP20.86■□□□□ 0.93
PRKCH-216ENST00000555542 POLR1DQ9Y2S0 133 aa20.86■□□□□ 0.93
PRKCH-216ENST00000555542 CUBNO60494 3623 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 B4DSR2 109 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 ARPC2O15144 300 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 SGCEO43556 437 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 RP2O75695 350 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 FABP3P05413 133 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 PCMT1P22061 227 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 CENPAP49450 140 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 MBNL2Q5VZF2 373 aaKnown RBP20.85■□□□□ 0.93
PRKCH-216ENST00000555542 SMARCD3Q6STE5 483 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 THSD4Q6ZMP0 1018 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 USP51Q70EK9 711 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 GLB1L2Q8IW92 636 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 FANK1Q8TC84 345 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 DHRS1Q96LJ7 313 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 GPX7Q96SL4 187 aaPredicted RBP20.85■□□□□ 0.93
PRKCH-216ENST00000555542 PLEK2Q9NYT0 353 aa20.85■□□□□ 0.93
PRKCH-216ENST00000555542 COA3Q9Y2R0 106 aaPredicted RBP20.85■□□□□ 0.93
PRKCH-216ENST00000555542 NGFP01138 241 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 TFP02787 698 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 SRP14P37108 136 aaKnown RBP20.84■□□□□ 0.93
PRKCH-216ENST00000555542 AQP6Q13520 282 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 HFEQ30201 348 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 GLCCI1Q86VQ1 547 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 DEFB107AQ8IZN7 70 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 LPAR2Q9HBW0 351 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 CYSLTR2Q9NS75 346 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 TREM2Q9NZC2 230 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 TMCC3Q9ULS5 477 aa20.84■□□□□ 0.93
PRKCH-216ENST00000555542 H3BSA7 217 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 WNT9BO14905 357 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 TIMM8AO60220 97 aaPredicted RBP20.83■□□□□ 0.93
PRKCH-216ENST00000555542 OR10H3O60404 316 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 PPP1R3DO95685 299 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 IGHV1-46P01743 117 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 COX5BP10606 129 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 GSTM3P21266 225 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 LIPAP38571 399 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 CRYBB2P43320 205 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 DVL1P1P54792 670 aaPredicted RBP20.83■□□□□ 0.93
PRKCH-216ENST00000555542 MVKQ03426 396 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 ZMAT1Q5H9K5 638 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 AVPI1Q5T686 147 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 OTPQ5XKR4 325 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 DNM1P34Q6PK57 102 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 RINLQ6ZS11 566 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 JAZF1Q86VZ6 243 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 ELMOD3Q96FG2 381 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 ERMAPQ96PL5 475 aaPredicted RBP20.83■□□□□ 0.93
PRKCH-216ENST00000555542 EGLN1Q9GZT9 426 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 NUAK2Q9H093 628 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 VSX1Q9NZR4 365 aaPredicted RBP20.83■□□□□ 0.93
PRKCH-216ENST00000555542 ASH2LQ9UBL3 628 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 CGGBP1Q9UFW8 167 aaPredicted RBP20.83■□□□□ 0.93
PRKCH-216ENST00000555542 CD300AQ9UGN4 299 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 GRIP1Q9Y3R0 1128 aa20.83■□□□□ 0.93
PRKCH-216ENST00000555542 CLDN25C9JDP6 229 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 MPZL1O95297 269 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 SEMG1P04279 462 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 RRM2P31350 389 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 SLC6A6P31641 620 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 IFNGR2P38484 337 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 MMP15P51511 669 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 FAM209AQ5JX71 171 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 C1orf94Q6P1W5 598 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 PTCHD4Q6ZW05 846 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 VASH1Q7L8A9 365 aaPredicted RBP20.82■□□□□ 0.92
PRKCH-216ENST00000555542 PIGWQ7Z7B1 504 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 ZER1Q7Z7L7 766 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.82■□□□□ 0.92
PRKCH-216ENST00000555542 NPEPL1Q8NDH3 523 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 TIMD4Q96H15 378 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 C1orf159Q96HA4 380 aa20.82■□□□□ 0.92
PRKCH-216ENST00000555542 IMPA2O14732 288 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 ICMTO60725 284 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 GAAP10253 952 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 NOS3P29474 1203 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 CRABP1P29762 137 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 FXYD6P3P58550 94 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 LSM6P62312 80 aaKnown RBP20.81■□□□□ 0.92
PRKCH-216ENST00000555542 CCL17Q92583 94 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 GPA33Q99795 319 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 FUZQ9BT04 418 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 IFT27Q9BW83 186 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 RACGAP1Q9H0H5 632 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 OR52D1Q9H346 318 aa20.81■□□□□ 0.92
PRKCH-216ENST00000555542 ZSCAN5BA6NJL1 495 aa20.8■□□□□ 0.92
PRKCH-216ENST00000555542 FAM157AC9JC47 383 aa20.8■□□□□ 0.92
PRKCH-216ENST00000555542 RENP00797 406 aa20.8■□□□□ 0.92
PRKCH-216ENST00000555542 MSMBP08118 114 aa20.8■□□□□ 0.92
PRKCH-216ENST00000555542 THBS2P35442 1172 aa20.8■□□□□ 0.92
PRKCH-216ENST00000555542 CDKN2AP42771 156 aaKnown RBP20.8■□□□□ 0.92
PRKCH-216ENST00000555542 MNAT1P51948 309 aa20.8■□□□□ 0.92
PRKCH-216ENST00000555542 RFX4Q33E94 735 aa20.8■□□□□ 0.92
PRKCH-216ENST00000555542 TMEM255AQ5JRV8 349 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms