RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 DTNBP1Q96EV8 351 aa1.13□□□□□ -2.23
SNX6-204ENST00000555541 WDR34Q96EX3 536 aa1.13□□□□□ -2.23
SNX6-204ENST00000555541 CNDP1Q96KN2 507 aa1.13□□□□□ -2.23
SNX6-204ENST00000555541 FMO2Q99518 471 aa1.13□□□□□ -2.23
SNX6-204ENST00000555541 ZSCAN16Q9H4T2 348 aaPredicted RBP1.13□□□□□ -2.23
SNX6-204ENST00000555541 ST3GAL6Q9Y274 331 aa1.13□□□□□ -2.23
SNX6-204ENST00000555541 PIGLQ9Y2B2 252 aa1.13□□□□□ -2.23
SNX6-204ENST00000555541 TSPOAP1O95153 1857 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 IGHV7-4-1A0A0J9YVY3 117 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 A0A1W2PPV9 198 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 DPM1O60762 260 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 CYB5R3P00387 301 aaPredicted RBP1.12□□□□□ -2.23
SNX6-204ENST00000555541 LHBP01229 141 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 CD3GP09693 182 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 WARSP23381 471 aaKnown RBP1.12□□□□□ -2.23
SNX6-204ENST00000555541 PSMB5P28074 263 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 MAGEA8P43361 318 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 ADARB1P78563 741 aaKnown RBP1.12□□□□□ -2.23
SNX6-204ENST00000555541 CDK5Q00535 292 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 FGL1Q08830 312 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 NT5DC3Q86UY8 548 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 PSTKQ8IV42 348 aaKnown RBP1.12□□□□□ -2.23
SNX6-204ENST00000555541 LIX1Q8N485 282 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 Q8NDZ9 215 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 GMCL1P1Q8NEA9 526 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 OR2T3Q8NH03 318 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 HGDQ93099 445 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 SERPINB12Q96P63 405 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 HSD17B10Q99714 261 aaKnown RBP1.12□□□□□ -2.23
SNX6-204ENST00000555541 RSG1Q9BU20 258 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 RMND5AQ9H871 391 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 KCNJ16Q9NPI9 418 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 C21orf62Q9NYP8 219 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 EPS15L1Q9UBC2 864 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 PTBP2Q9UKA9 531 aaKnown RBP1.12□□□□□ -2.23
SNX6-204ENST00000555541 COL11A1P12107 1806 aaPredicted RBP1.12□□□□□ -2.23
SNX6-204ENST00000555541 MAPK8IP3Q9UPT6 1336 aa1.12□□□□□ -2.23
SNX6-204ENST00000555541 OR6C74A6NCV1 312 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 K7EPI3 171 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 DYNC1I1O14576 645 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 ANGPT2O15123 496 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 KLHL2O95198 593 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 F2RP25116 425 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 CEACAM3P40198 252 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 ACAA2P42765 397 aaKnown RBP1.11□□□□□ -2.23
SNX6-204ENST00000555541 SYKP43405 635 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 GPX6P59796 221 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 ELP6Q0PNE2 266 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 TWF1Q12792 350 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 EXOC3L2Q2M3D2 409 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 STUMQ69YW2 141 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 ADNP2Q6IQ32 1131 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 RBBP8Q99708 897 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 CWH43Q9H720 699 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 PEX16Q9Y5Y5 336 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 BAHCC1Q9P281 2608 aa1.11□□□□□ -2.23
SNX6-204ENST00000555541 IGHV1-3A0A0C4DH29 117 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 ZNF816-ZNF321PA0A0X1KG74 233 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 SMPD2O60906 423 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 SLC22A5O76082 557 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 NDUFB10O96000 172 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 FGGP02679 453 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 HSPA5P11021 654 aaKnown RBP1.1□□□□□ -2.23
SNX6-204ENST00000555541 HRES1P13985 223 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 PRLHRP49683 370 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 GZMMP51124 257 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 KRTAP12-1P59990 96 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 PPP1CBP62140 327 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 ACTG2P63267 376 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 ECH1Q13011 328 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 MAD2L1BPQ15013 274 aaPredicted RBP1.1□□□□□ -2.23
SNX6-204ENST00000555541 PGGHGQ32M88 737 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 DEFB134Q4QY38 66 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 PDIK1LQ8N165 341 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 FBXL13Q8NEE6 735 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 OR2L3Q8NG85 312 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 RHEBL1Q8TAI7 183 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 CXorf40AQ8TE69 158 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 UBE2Q2Q8WVN8 375 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 THRSPQ92748 146 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 IFT74Q96LB3 600 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 CTNNA3Q9UI47 895 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 VANGL2Q9ULK5 521 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 ING4Q9UNL4 249 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 ATP6V0A2Q9Y487 856 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 KCNE3Q9Y6H6 103 aa1.1□□□□□ -2.23
SNX6-204ENST00000555541 COL5A3P25940 1745 aaPredicted RBP1.09□□□□□ -2.23
SNX6-204ENST00000555541 TRAV19A0A0A6YYK7 116 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 IGHV3-72A0A0B4J1Y9 119 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 OR6C70A6NIJ9 312 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 GPR89AB7ZAQ6 455 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 ASGR1P07306 291 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 CTSLP07711 333 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 GPR89BP0CG08 455 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 RAB3AP20336 220 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 PSMA5P28066 241 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 CD86P42081 329 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 SSR1P43307 286 aaKnown RBP1.09□□□□□ -2.23
SNX6-204ENST00000555541 IDH2P48735 452 aaKnown RBP1.09□□□□□ -2.23
SNX6-204ENST00000555541 HCAR3P49019 387 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms