RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 LILRA1O75019 489 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 SLC43A1O75387 559 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 OR7A10O76100 309 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 MT-ATP6P00846 226 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 SAGP10523 405 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-215ENST00000554656 PIPP12273 146 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-215ENST00000554656 HLA-DOBP13765 273 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 HOXB1P14653 301 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-215ENST00000554656 CBR1P16152 277 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF43P17038 809 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 GIFP27352 417 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 GRPRP30550 384 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 SLC6A6P31641 620 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 THBS2P35442 1172 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 ALDH3B2P48448 385 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 SLC35A2P78381 396 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 EFNB1P98172 346 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 MVKQ03426 396 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 MS4A18Q3C1V0 323 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 ZBED5Q49AG3 693 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 SMARCD3Q6STE5 483 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 LNX2Q8N448 690 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 ANKK1Q8NFD2 765 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 OR4F15Q8NGB8 312 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 OR8D4Q8NGM9 314 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 CNIH3Q8TBE1 160 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 TMEM163Q8TC26 289 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF75AQ96N20 296 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 SIGLEC11Q96RL6 698 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 TSSK6Q9BXA6 273 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 PLA2G12AQ9BZM1 189 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 FAM192AQ9GZU8 254 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 FN3KQ9H479 309 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 CRLF2Q9HC73 371 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 MYOZ1Q9NP98 299 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-215ENST00000554656 CNOT2Q9NZN8 540 aaKnown RBP9.12□□□□□ -0.95
SHMT2-215ENST00000554656 TRAV36DV7A0A075B6V5 113 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 LOC102725191A0A1B0GVB3 256 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 IRGMA1A4Y4 181 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 EFCAB10A6NFE3 127 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 LYNX1G3V0Z9 82 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 IDH3BO43837 385 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 OR2T1O43869 369 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 FAM20BO75063 409 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 NDUFB2O95178 105 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TGFAP01135 160 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 HLA-HP01893 362 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 BGLAPP02818 100 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TFAP2AP05549 437 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TACSTD2P09758 323 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TSPAN19P0C672 248 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 LYNX1P0DP58 116 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 DAOP14920 347 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 JUNBP17275 347 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-215ENST00000554656 FUT1P19526 365 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 NPR2P20594 1047 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 PAX7P23759 505 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 EEF1B2P24534 225 aaKnown RBP9.11□□□□□ -0.95
SHMT2-215ENST00000554656 GTF2E2P29084 291 aaKnown RBP9.11□□□□□ -0.95
SHMT2-215ENST00000554656 FMO3P31513 532 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 SNTB2Q13425 540 aaKnown RBP9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TMED1Q13445 227 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 RIN1Q13671 783 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 MFSD13AQ14CX5 517 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 SNAPC1Q16533 368 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 CR1LQ2VPA4 569 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 FAM69AQ5T7M9 428 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TMEM236Q5W0B7 351 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 ACSM5Q6NUN0 579 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 PRSS48Q7RTY5 328 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 OAFQ86UD1 273 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 GPR137CQ8N3F9 429 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 SVOPQ8N4V2 548 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 ADPRHL1Q8NDY3 354 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 BPIFB6Q8NFQ5 453 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 MYDGFQ969H8 173 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 MS4A3Q96HJ5 214 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 PLEKHA8Q96JA3 519 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 MOGAT1Q96PD6 335 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 GPX7Q96SL4 187 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-215ENST00000554656 EMC6Q9BV81 110 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 EGLN3Q9H6Z9 239 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 FKBP14Q9NWM8 211 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 B3GNT2Q9NY97 397 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TVP23BQ9NYZ1 205 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF224Q9NZL3 707 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 PSORS1C1Q9UIG5 152 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF229Q9UJW7 825 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 HIF3AQ9Y2N7 669 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 SNX5Q9Y5X3 404 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 TENM1Q9UKZ4 2725 aa9.11□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF99A8MXY4 864 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-215ENST00000554656 LRRN3E7EW58 273 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 KPNA4O00629 521 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-215ENST00000554656 BHLHE40O14503 412 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 IMPA2O14732 288 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 ARPC3O15145 178 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 SURF4O15260 269 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 PRODHO43272 600 aa9.1□□□□□ -0.95
SHMT2-215ENST00000554656 RGS10O43665 173 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms