RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 EFNA4P52798 201 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 IL5RAQ01344 420 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 CDK5R2Q13319 367 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 CAMK2DQ13557 499 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 GABRA6Q16445 453 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 HIST3H3Q16695 136 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 PHYHD1Q5SRE7 291 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 OR7E24Q6IFN5 339 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 LEG1Q6P5S2 330 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 ADCK1Q86TW2 530 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 CPOQ8IVL8 374 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 NOXO1Q8NFA2 376 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 CNIH3Q8TBE1 160 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 ZNRF4Q8WWF5 429 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 TMEM54Q969K7 222 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC25A44Q96H78 314 aaPredicted RBP12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 PRRG3Q9BZD7 231 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 Q9H521 79 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 CHODLQ9H9P2 273 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 PMF1-BGLAPU3KQ54 211 aa12.17□□□□□ -0.46
SPTLC2-202ENST00000554365 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 CENPBD1B2RD01 187 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 DCTN6O00399 190 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 ITGA5P08648 1049 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 CSF3P09919 207 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 CLUP10909 449 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 ZNF3P17036 446 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 GZMKP49863 264 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC25A1P53007 311 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 TEKQ02763 1124 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 LGALS3BPQ08380 585 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 GGTLC2Q14390 218 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 OCLNQ16625 522 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 CARD17Q5XLA6 110 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 NIPAL3Q6P499 406 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 PLBD1Q6P4A8 553 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 AAED1Q7RTV5 226 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 JAZF1Q86VZ6 243 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 C20orf196Q8IYI0 205 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 PLEKHA8Q96JA3 519 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 LRR1Q96L50 414 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 ZNF582Q96NG8 517 aaPredicted RBP12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 TSSK2Q96PF2 358 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 ALG12Q9BV10 488 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 TEX12Q9BXU0 123 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 DNAJC27Q9NZQ0 273 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 UPB1Q9UBR1 384 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 MALT1Q9UDY8 824 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 KCNS2Q9ULS6 477 aa12.16□□□□□ -0.46
SPTLC2-202ENST00000554365 ANK2Q01484 3957 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 IGLV1-36A0A0B4J1U3 117 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 XKRYO14609 159 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 AHCYL1O43865 530 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 MPZL2O60487 215 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 ENTPD6O75354 484 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 IGHG1P01857 330 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 CTLA4P16410 223 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 ZNF133P52736 654 aaPredicted RBP12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 FMODQ06828 376 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 CARTPTQ16568 116 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 SMN1Q16637 294 aaKnown RBP12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 FAM166AQ6J272 317 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 LRFN4Q6PJG9 635 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 SLC25A47Q6Q0C1 308 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 LINGO2Q7L985 606 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 HDDC2Q7Z4H3 204 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 OR6V1Q8N148 313 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 WDR31Q8NA23 367 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 SYT14Q8NB59 555 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 OR9Q1Q8NGQ5 310 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 ZNF566Q969W8 418 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 FBXO17Q96EF6 278 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 SYT4Q9H2B2 425 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 RPRD1BQ9NQG5 326 aaKnown RBP12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 LRCH1Q9Y2L9 728 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 AMDHD2Q9Y303 409 aa12.15□□□□□ -0.46
SPTLC2-202ENST00000554365 LOC100289279A0A1B0GTE1 492 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 ZNF726A6NNF4 738 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 PRR23D1E9PI22 279 aaPredicted RBP12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 AKAP8O43823 692 aaKnown RBP12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 UPK3AO75631 287 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 RENP00797 406 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 GYPBP06028 91 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 PRR23D2P0DMB1 279 aaPredicted RBP12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 SPI1P17947 270 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 FMO3P31513 532 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 THBS2P35442 1172 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 CSNK1A1P48729 337 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 PDLIM4P50479 330 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 MED21Q13503 144 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 C6orf141Q5SZD1 244 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 FAM120AOSQ5T036 256 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 LINC01590Q5TEZ4 76 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 NXNL2Q5VZ03 156 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
SPTLC2-202ENST00000554365 ZBTB46Q86UZ6 589 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms