RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 MGAQ8IWI9 3026 aa11.32□□□□□ -0.6
VIPAS39-206ENST00000553888 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 CXCL13O43927 109 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 CSF3P09919 207 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 EPXP11678 715 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 IL7P13232 177 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF17P17021 662 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 EVX1P49640 407 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 B2MP61769 119 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 AIMP2Q13155 320 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 IL18Q14116 193 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 CREB3L2Q70SY1 520 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 TEX19Q8NA77 164 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 CLEC1AQ8NC01 280 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 OR6X1Q8NH79 312 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 RNF128Q8TEB7 428 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 MNTQ99583 582 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 CSAG2Q9Y5P2 127 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 TRAV1-2A0A0B4J238 106 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF726A6NNF4 738 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 PHYHO14832 338 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 LMX1BO60663 402 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 GATBO75879 557 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 ARL6IP5O75915 188 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 CD1AP06126 327 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 ADRA2CP18825 462 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 LAP3P28838 519 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 RBMS1P29558 406 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 ROM1Q03395 351 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 FAM205BPQ63HN1 556 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 TPRA1Q86W33 373 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 IL17RDQ8NFM7 739 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 OR9K2Q8NGE7 335 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF837Q96EG3 531 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 EXTL2Q9UBQ6 330 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 TEKT2Q9UIF3 430 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 LHFPL6Q9Y693 200 aa11.31□□□□□ -0.6
VIPAS39-206ENST00000553888 A0A0G2JMP0 313 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 A0A0X1KG70 313 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 TMEM127O75204 238 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 MAS1P04201 325 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 ITGB2P05107 769 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 MAGEA5P43359 124 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 RIDAP52758 137 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 BLVRAP53004 296 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 SRYQ05066 204 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 CARTPTQ16568 116 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 Q499Y3 187 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 THEM4Q5T1C6 240 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 SLC25A47Q6Q0C1 308 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 TMPRSS7Q7RTY8 843 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 ZIC4Q8N9L1 334 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 OR4M2Q8NGB6 313 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 OR4M1Q8NGD0 313 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 ASB17Q8WXJ9 295 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 TMEM106AQ96A25 262 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 DOCK7Q96N67 2140 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 TRBV5-5A0A0J9YX44 114 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 NPIPA2E9PIF3 369 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 NPIPA3F8WFD2 350 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 LRP3O75074 770 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 ADRB1P08588 477 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 NUBP1P53384 320 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF239Q16600 458 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 JMJD6Q6NYC1 403 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 MZT2AQ6P582 158 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 KCTD18Q6PI47 426 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 GDPD3Q7L5L3 318 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 GALNTL5Q7Z4T8 443 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 GALNT16Q8N428 558 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 OR10H5Q8NGA6 315 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 OR10D3Q8NH80 312 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 TSEN15Q8WW01 171 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 OR2M2Q96R28 347 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 PPP1R3EQ9H7J1 279 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 CYB5R1Q9UHQ9 305 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 ITGB1BP2Q9UKP3 347 aa11.3□□□□□ -0.6
VIPAS39-206ENST00000553888 FUOMA2VDF0 154 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 SRSF10O75494 262 aaKnown RBP11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 GSTT2P0CG29 244 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 GSTT2BP0CG30 244 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 POU3F2P20265 443 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 CARD18P57730 90 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 CD300CQ08708 224 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 PCK2Q16822 640 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 TEX30Q5JUR7 227 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 ASPHD2Q6ICH7 369 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 SLAMF6Q96DU3 332 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 NEDD4LQ96PU5 975 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 SOSTQ9BQB4 213 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 CCDC32Q9BV29 185 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 COMMD4Q9H0A8 199 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 SLC6A15Q9H2J7 730 aa11.29□□□□□ -0.6
VIPAS39-206ENST00000553888 ZNF703Q9H7S9 590 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 216.4 ms