RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ARPC4-TTLL3A0A0A6YYG9 625 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 LOC100131303A0A0U1RQF7 123 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SERTM2A0A1B0GWG4 89 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SMCO2A6NFE2 343 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 VSTM2BA6NLU5 285 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 LRRIQ3A6PVS8 624 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 HIDE1A8MVS5 230 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SPECC1L-ADORA2AF8WAN1 911 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 L7N2F9 121 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 PPP1R2P9O14990 202 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 CASC3O15234 703 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SCRG1O75711 98 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 H6PDO95479 791 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 FGFR1OPO95684 399 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 P04436 131 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 DCNP07585 359 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 PABPC4LP0CB38 370 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 STAG3L3P0CL85 134 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SHMT2P34897 504 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 CRYBB1P53674 252 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 CDH6P55285 790 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 HERVK_113P61574 105 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 RPS15P62841 145 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 ENPEPQ07075 957 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 EIF4EBP1Q13541 118 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 GNMTQ14749 295 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 AANATQ16613 207 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 MICBQ29980 383 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 HSDL1Q3SXM5 330 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 HSP90AA4PQ58FG1 418 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 MARCH8Q5T0T0 291 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 LRRC66Q68CR7 880 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SSX9Q7RTT3 188 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 BIVMQ86UB2 503 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 MICU2Q8IYU8 434 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 FTMTQ8N4E7 242 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 BPIFCQ8NFQ6 507 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 OR4C5Q8NGB2 326 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 OR1L6Q8NGR2 347 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 OR2A12Q8NGT7 310 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 NEIL3Q8TAT5 605 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 GPR151Q8TDV0 419 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 MYDGFQ969H8 173 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 CCDC126Q96EE4 140 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 PANX2Q96RD6 677 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 TAAR1Q96RJ0 339 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 MBOAT4Q96T53 435 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 CNN2Q99439 309 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 CHIAQ9BZP6 476 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 API5Q9BZZ5 524 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 ACTR6Q9GZN1 396 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 NARFLQ9H6Q4 476 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 TMEM185BQ9H7F4 350 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SUDS3Q9H7L9 328 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 NTN4Q9HB63 628 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 RPRD1BQ9NQG5 326 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 SPRR3Q9UBC9 169 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 BTNL2Q9UIR0 455 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 KCNIP3Q9Y2W7 256 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 STARD10Q9Y365 291 aa2.27□□□□□ -2.05
SCFD1-210ENST00000553693 BAZ2AQ9UIF9 1905 aaKnown RBP2.27□□□□□ -2.05
SCFD1-210ENST00000553693 GCN1Q92616 2671 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SPTBN2O15020 2390 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 IGLV4-60A0A075B6I1 120 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 A0A0J9YXY3 114 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 TUBAL3A6NHL2 446 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OR5B21A6NL26 309 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 ANKRD63C9JTQ0 380 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 CHMP2AO43633 222 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 CACNG3O60359 315 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 NMT2O60551 498 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 UPK3AO75631 287 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OR2J3O76001 311 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 IGHV4-34P06331 123 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OR8U8P0C7N1 319 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SMIM10L2AP0DMW4 78 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SMIM10L2BP0DMW5 78 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 HOXB8P17481 243 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 ATP6V1B2P21281 511 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 GTF2E2P29084 291 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 HNRNPH3P31942 346 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OTX1P32242 354 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 RORAP35398 523 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 QARSP47897 775 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 PLP1P60201 277 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SELENOTP62341 195 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 ERVK-25P63136 954 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 MGAT3Q09327 533 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 DNAJC3Q13217 504 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OR5I1Q13606 314 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 CHRNA6Q15825 494 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 DUSP7Q16829 419 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 HADHQ16836 314 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 PARP15Q460N3 678 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 TIGITQ495A1 244 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 C1orf220Q5T0J3 134 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 C1orf185Q5T7R7 199 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 N4BP2L1Q5TBK1 243 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms