RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 ARL6IP5O75915 188 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 YES1P07947 543 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 UCHL1P09936 223 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 FCGR2AP12318 317 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 NPR2P20594 1047 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 CALRP27797 417 aaKnown RBP11.2□□□□□ -0.62
CACNB3-223ENST00000552480 UCNP55089 124 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 MFGE8Q08431 387 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-223ENST00000552480 ENDOGQ14249 297 aaKnown RBP11.2□□□□□ -0.62
CACNB3-223ENST00000552480 ZNF829Q3KNS6 432 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-223ENST00000552480 CFAP77Q6ZQR2 320 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 RHOUQ7L0Q8 258 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 TPRA1Q86W33 373 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-223ENST00000552480 TUSC5Q8IXB3 177 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 ZNF676Q8N7Q3 588 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 RBMXL3Q8N7X1 1067 aaKnown RBP11.2□□□□□ -0.62
CACNB3-223ENST00000552480 OR10S1Q8NGN2 331 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 S100ZQ8WXG8 99 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 ZNF416Q9BWM5 594 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 C6orf62Q9GZU0 229 aaPredicted RBP11.2□□□□□ -0.62
CACNB3-223ENST00000552480 SLCO5A1Q9H2Y9 848 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 NIPAL2Q9H841 368 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 GPR35Q9HC97 309 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 SMURF1Q9HCE7 757 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 GP6Q9HCN6 339 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 AKIP1Q9NQ31 210 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 CENPMQ9NSP4 180 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 ASH2LQ9UBL3 628 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
CACNB3-223ENST00000552480 MED12Q93074 2177 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 TRAV1-2A0A0B4J238 106 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 TRBV5-5A0A0J9YX44 114 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 ZNF879B4DU55 563 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 PNPP00491 289 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 MAPK3P27361 379 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-223ENST00000552480 S100A5P33763 92 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 TMPRSS3P57727 454 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 HIST1H3AP68431 136 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 ZNF846Q147U1 533 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 TBR1Q16650 682 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 Q499Y3 187 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 FAM27D1Q5T7N8 215 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 HIST2H3PS2Q5TEC6 136 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 FAM27BQ5VT28 67 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 KLHL24Q6TFL4 600 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 PLXDC2Q6UX71 529 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 HIST2H3AQ71DI3 136 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 LINGO2Q7L985 606 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 ADGRE4PQ86SQ3 457 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 IL17RDQ8NFM7 739 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 AP3S1Q92572 193 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 HTRA1Q92743 480 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 THRSPQ92748 146 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 SARAFQ96BY9 339 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 ALKBH3Q96Q83 286 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-223ENST00000552480 OR14A2Q96R54 314 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 TAAR6Q96RI8 345 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 KCNS3Q9BQ31 491 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 WDR12Q9GZL7 423 aaKnown RBP11.19□□□□□ -0.62
CACNB3-223ENST00000552480 PPIL3Q9H2H8 161 aaKnown RBP11.19□□□□□ -0.62
CACNB3-223ENST00000552480 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 CALHM2Q9HA72 323 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 PLGRKTQ9HBL7 147 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 CRLF2Q9HC73 371 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 HMG20AQ9NP66 347 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 PNRC2Q9NPJ4 139 aaKnown RBP11.19□□□□□ -0.62
CACNB3-223ENST00000552480 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 CLCF1Q9UBD9 225 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 PLEKHB1Q9UF11 243 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-223ENST00000552480 FBXL3Q9UKT7 428 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 GTF2A1LQ9UNN4 478 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 B3GNT3Q9Y2A9 372 aa11.19□□□□□ -0.62
CACNB3-223ENST00000552480 A0A087WV48 116 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 CLDN25C9JDP6 229 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 LOC110117498-PIK3R3F6TDL0 507 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 RPL36A-HNRNPH2H7BZ11 118 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 K7EM74 188 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 TAF4O00268 1085 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 KRT33AO76009 404 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 CRYABP02511 175 aaKnown RBP11.18□□□□□ -0.62
CACNB3-223ENST00000552480 CST2P09228 141 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 CFL1P23528 166 aaKnown RBP11.18□□□□□ -0.62
CACNB3-223ENST00000552480 HSD11B1P28845 292 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 MMP16P51512 607 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 BMXP51813 675 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 GRB2P62993 217 aaKnown RBP11.18□□□□□ -0.62
CACNB3-223ENST00000552480 DCTN2Q13561 401 aaKnown RBP11.18□□□□□ -0.62
CACNB3-223ENST00000552480 CEACAM16Q2WEN9 425 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 HSD17B12Q53GQ0 312 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 TSPO2Q5TGU0 170 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 MFSD4AQ8N468 514 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 GJC3Q8NFK1 279 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 GPR148Q8TDV2 347 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 ZNF837Q96EG3 531 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-223ENST00000552480 DERL3Q96Q80 235 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 FOXB1Q99853 325 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 MOB1AQ9H8S9 216 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 G6PC2Q9NQR9 355 aa11.18□□□□□ -0.62
CACNB3-223ENST00000552480 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms