RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 MMP27Q9H306 513 aa13.68□□□□□ -0.22
RAB5C-209ENST00000552162 POFUT1Q9H488 388 aa13.68□□□□□ -0.22
RAB5C-209ENST00000552162 C20orf141Q9NUB4 165 aa13.68□□□□□ -0.22
RAB5C-209ENST00000552162 ARMCX1Q9P291 453 aa13.68□□□□□ -0.22
RAB5C-209ENST00000552162 NDRG4Q9ULP0 352 aaKnown RBP13.68□□□□□ -0.22
RAB5C-209ENST00000552162 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 TMEM178BH3BS89 294 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 M0QZ24 198 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 SURF4O15260 269 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 TSPAN19P0C672 248 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 KITLGP21583 273 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 MTPNP58546 118 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 GNB2P62879 340 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 TOP3AQ13472 1001 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-209ENST00000552162 SELPLGQ14242 412 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 DEFB112Q30KQ8 113 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 AGKQ53H12 422 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 PATL1Q86TB9 770 aaKnown RBP13.67□□□□□ -0.22
RAB5C-209ENST00000552162 NKAIN4Q8IVV8 208 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 POU5F2Q8N7G0 328 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 CLDN22Q8N7P3 220 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 SLC26A7Q8TE54 656 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 TMEM255BQ8WV15 326 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 ZDHHC16Q969W1 377 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 TAMM41Q96BW9 452 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 OR2V2Q96R30 315 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 PKP2Q99959 881 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 CITED1Q99966 193 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 EBF4Q9BQW3 602 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 ALG12Q9BV10 488 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 TXNIPQ9H3M7 391 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 TNFRSF19Q9NS68 423 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 NKIRAS1Q9NYS0 192 aa13.67□□□□□ -0.22
RAB5C-209ENST00000552162 A0A1W2PPL8 197 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 SRRM5B3KS81 715 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 IGF2P01344 180 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 CRYBA1P05813 215 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 RBM34P42696 430 aaKnown RBP13.66□□□□□ -0.22
RAB5C-209ENST00000552162 GUCA1AP43080 201 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-209ENST00000552162 SLC18A1P54219 525 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 ENDOGQ14249 297 aaKnown RBP13.66□□□□□ -0.22
RAB5C-209ENST00000552162 LAPTM4AQ15012 233 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 OLFML2AQ68BL7 652 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 FIP1L1Q6UN15 594 aaKnown RBP13.66□□□□□ -0.22
RAB5C-209ENST00000552162 BRD3OSQ6XYD6 125 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 FOXL2NBQ6ZUU3 175 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 DHDDSQ86SQ9 333 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 KLBQ86Z14 1044 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 SLC30A8Q8IWU4 369 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 OR10S1Q8NGN2 331 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 LIPHQ8WWY8 451 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 RAB40AQ8WXH6 277 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 DACT3Q96B18 629 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-209ENST00000552162 RBP7Q96R05 134 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 MARCH7Q9H992 704 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 GCM1Q9NP62 436 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 TBCCD1Q9NVR7 557 aa13.66□□□□□ -0.22
RAB5C-209ENST00000552162 ZNF205O95201 554 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 MSR1P21757 451 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 TUBG1P23258 451 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 CPT2P23786 658 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 IDH3AP50213 366 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 TAS2R41P59536 307 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 RELBQ01201 579 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 ALG10Q5BKT4 473 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 RHOUQ7L0Q8 258 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 FNDC8Q8TC99 324 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 TMEM239Q8WW34 195 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 CMBLQ96DG6 245 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 PRDM13Q9H4Q3 707 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 TUBG2Q9NRH3 451 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 C1RLQ9NZP8 487 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 MIOXQ9UGB7 285 aa13.65□□□□□ -0.22
RAB5C-209ENST00000552162 C12orf71A8MTZ7 269 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 IFNL4K9M1U5 179 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 TIMM23O14925 209 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 DOK2O60496 412 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 NDUFA7O95182 113 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 COX5BP10606 129 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 THRBP10828 461 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 HTR5AP47898 357 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 ERFP50548 548 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 CRYBA2P53672 197 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 RPL27P61353 136 aaKnown RBP13.64□□□□□ -0.23
RAB5C-209ENST00000552162 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
RAB5C-209ENST00000552162 FAM205BPQ63HN1 556 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 SYT9Q86SS6 491 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 ZNF420Q8TAQ5 688 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-209ENST00000552162 RASSF5Q8WWW0 418 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 UBE2FQ969M7 185 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 NEIL1Q96FI4 390 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-209ENST00000552162 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 CGREF1Q99674 301 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 CCDC28BQ9BUN5 200 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 PARD6BQ9BYG5 372 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 CHIAQ9BZP6 476 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 TMEM165Q9HC07 324 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 HIF3AQ9Y2N7 669 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 SH3GLB1Q9Y371 365 aa13.64□□□□□ -0.23
RAB5C-209ENST00000552162 KIR2DS1A0A191URI9 304 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms