RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 RGS7BPQ6MZT1 257 aaPredicted RBP11.05□□□□□ -0.64
NR4A1-215ENST00000550557 RBM45Q8IUH3 476 aaKnown RBP11.05□□□□□ -0.64
NR4A1-215ENST00000550557 SFTPA2Q8IWL1 248 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 THAP7Q9BT49 309 aaPredicted RBP11.05□□□□□ -0.64
NR4A1-215ENST00000550557 LRFN3Q9BTN0 628 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 DHHO43323 396 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 PRSS23O95084 383 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 PRSS3P35030 304 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 CEACAM16Q2WEN9 425 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 STK35Q8TDR2 534 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 CDCA4Q9BXL8 241 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 C11orf54Q9H0W9 315 aaPredicted RBP11.05□□□□□ -0.64
NR4A1-215ENST00000550557 ESRP2Q9H6T0 727 aaKnown RBP11.05□□□□□ -0.64
NR4A1-215ENST00000550557 PTTG3PQ9NZH4 202 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 CLEC2DQ9UHP7 191 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 FBXL3Q9UKT7 428 aa11.05□□□□□ -0.64
NR4A1-215ENST00000550557 TOXO94900 526 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 GSTP1P09211 210 aaKnown RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 PCMT1P22061 227 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 CAV3P56539 151 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 RAB5BP61020 215 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 AGERQ15109 404 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 METAP1DQ6UB28 335 aaPredicted RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 ARIH2OSQ8N7S6 290 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 MAFIPQ8WZ33 124 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 UBQLN3Q9H347 655 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 ZNF355PQ9NSJ1 428 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 GPRIN2O60269 458 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 B4GALT1P15291 398 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 CD53P19397 219 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 ZNF83P51522 516 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 EXOSC6Q5RKV6 272 aaKnown RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 RPL22L1Q6P5R6 122 aaKnown RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 LYPD8Q6UX82 237 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 CCDC71LQ8N9Z2 235 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 OR5D18Q8NGL1 313 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 NUBPLQ8TB37 319 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 RASL10BQ96S79 203 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 SLIRPQ9GZT3 109 aaKnown RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 BCL2L10Q9HD36 194 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 ZNF346Q9UL40 294 aaKnown RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 PDCD11Q14690 1871 aaKnown RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 SHISA8B8ZZ34 492 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 P2RY10O00398 339 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 ZNF883P0CG24 379 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 ARSKQ6UWY0 536 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 TMEM108Q6UXF1 575 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 TMEM68Q96MH6 324 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 NELFAQ9H3P2 528 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 SYNPO2LQ9H987 977 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 SLC5A6Q9Y289 635 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 LRRC37A2A6NM11 1700 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 GDF9O60383 454 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 RAE1P78406 368 aaKnown RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 ATXN7L3Q14CW9 347 aaPredicted RBP11.04□□□□□ -0.64
NR4A1-215ENST00000550557 COX15Q7KZN9 410 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 FAM109AQ8N4B1 249 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 SCGB1C1Q8TD33 95 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 PBDC1Q9BVG4 233 aa11.04□□□□□ -0.64
NR4A1-215ENST00000550557 SBF1O95248 1867 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 TMEM212A6NML5 194 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 GABRPO00591 440 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 HSPB6O14558 160 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 ABCD4O14678 606 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 NCR1O76036 304 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 GUSBP08236 651 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 DIO1P49895 249 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 EMDP50402 254 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 RPL18Q07020 188 aaKnown RBP11.03□□□□□ -0.64
NR4A1-215ENST00000550557 P2RY14Q15391 338 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 COMMD7Q86VX2 200 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 MFSD4AQ8N468 514 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 SCNM1Q9BWG6 230 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 ZNF281Q9Y2X9 895 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 NUP214P35658 2090 aaPredicted RBP11.03□□□□□ -0.64
NR4A1-215ENST00000550557 IGHV3-64DA0A0J9YX35 117 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 NPIPB8E9PQR5 432 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 GPX5O75715 221 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 IFNA1P01562 189 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 LRRC56Q8IYG6 542 aaPredicted RBP11.03□□□□□ -0.64
NR4A1-215ENST00000550557 SORCS2Q96PQ0 1159 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 MAN2C1Q9NTJ4 1040 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 RBFOX1Q9NWB1 397 aaKnown RBP11.03□□□□□ -0.64
NR4A1-215ENST00000550557 TRBV5-3A0A0A0MS03 114 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 SLC22A23A1A5C7 686 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 ZNF732B4DXR9 585 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 SC5DO75845 299 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 GLCEO94923 617 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 NKX2-2O95096 273 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 TRAPPC2P0DI81 140 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 TRAPPC2BP0DI82 140 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 OPRM1P35372 400 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 FZD5Q13467 585 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 PPA1Q15181 289 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 GSG1LQ6UXU4 331 aa11.03□□□□□ -0.64
NR4A1-215ENST00000550557 BCDIN3DQ7Z5W3 292 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms