RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 LRFN1Q9P244 771 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 CYB5R1Q9UHQ9 305 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 POLR1DQ9Y2S0 133 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 TRBV5-7A0A0A0MS05 114 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 RER1O15258 196 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 CD63P08962 238 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 ITGA3P26006 1051 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 H3F3CQ6NXT2 135 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 ZNF454Q8N9F8 522 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 PHYHIPQ92561 330 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 SLITRK2Q9H156 845 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 MRPL15Q9P015 296 aaKnown RBP18.61■□□□□ 0.57
PRDM4-205ENST00000550376 ASH2LQ9UBL3 628 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 LHFPL6Q9Y693 200 aa18.61■□□□□ 0.57
PRDM4-205ENST00000550376 P2RY10O00398 339 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 PDCD5O14737 125 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 MAP2K3P46734 347 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 B3GALT5-AS1P59052 145 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 RAB43Q86YS6 212 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 OR6X1Q8NH79 312 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 ASB5Q8WWX0 329 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 G6PC2Q9NQR9 355 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 POU2F3Q9UKI9 436 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 A0A0B4J293 547 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 SRSF10O75494 262 aaKnown RBP18.6■□□□□ 0.57
PRDM4-205ENST00000550376 MAPK3P27361 379 aaPredicted RBP18.6■□□□□ 0.57
PRDM4-205ENST00000550376 SUCLG1P53597 346 aaKnown RBP18.6■□□□□ 0.57
PRDM4-205ENST00000550376 MRPL28Q13084 256 aaKnown RBP18.6■□□□□ 0.57
PRDM4-205ENST00000550376 RIN1Q13671 783 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 PCK2Q16822 640 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 FAM205BPQ63HN1 556 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 ROBO4Q8WZ75 1007 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 RFT1Q96AA3 541 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 AUNIPQ9H7T9 357 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 KLHL9Q9P2J3 617 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 OR52A1Q9UKL2 312 aa18.6■□□□□ 0.57
PRDM4-205ENST00000550376 A6NL46 340 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 HLA-DQB1P01920 261 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 SELENOPP49908 381 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 PRKXP51817 358 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 AGFG1P52594 562 aaKnown RBP18.59■□□□□ 0.57
PRDM4-205ENST00000550376 NKX2-5P52952 324 aaPredicted RBP18.59■□□□□ 0.57
PRDM4-205ENST00000550376 FDX2Q6P4F2 183 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.59■□□□□ 0.57
PRDM4-205ENST00000550376 IL22RA1Q8N6P7 574 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 OR51A2Q8NGJ7 313 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 TRIM63Q969Q1 353 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 ZNF837Q96EG3 531 aaPredicted RBP18.59■□□□□ 0.57
PRDM4-205ENST00000550376 TMEM41AQ96HV5 264 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 PIGQQ9BRB3 760 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 MYEF2Q9P2K5 600 aaKnown RBP18.59■□□□□ 0.57
PRDM4-205ENST00000550376 DHDHQ9UQ10 334 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 R4GMQ9 66 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 SPENQ96T58 3664 aaKnown RBP18.59■□□□□ 0.57
PRDM4-205ENST00000550376 MEIOCA2RUB1 952 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 PMS2P2O95744 297 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 SGCAQ16586 387 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 HYAL4Q2M3T9 481 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 CREB3L2Q70SY1 520 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 SYNPRQ8TBG9 265 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 GAL3ST1Q99999 423 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 TAS2R4Q9NYW5 299 aa18.59■□□□□ 0.57
PRDM4-205ENST00000550376 GDF2Q9UK05 429 aaPredicted RBP18.59■□□□□ 0.57
PRDM4-205ENST00000550376 FAM240BA0A1B0GVZ2 78 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 TERTO14746 1132 aaKnown RBP18.58■□□□□ 0.57
PRDM4-205ENST00000550376 GDF1P27539 372 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 NTF4P34130 210 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 CCR9P51686 369 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 RAC1P63000 192 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 RSPO4Q2I0M5 234 aaPredicted RBP18.58■□□□□ 0.57
PRDM4-205ENST00000550376 DCAF10Q5QP82 559 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 SLC25A47Q6Q0C1 308 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 ADPRHL1Q8NDY3 354 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 OR51D1Q8NGF3 324 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 OR6N1Q8NGY5 312 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 RNF133Q8WVZ7 376 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 FAM86C1Q9NVL1 165 aa18.58■□□□□ 0.57
PRDM4-205ENST00000550376 AQP8O94778 261 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 CELA3AP09093 270 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 PRKAR1AP10644 381 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 DDOSTP39656 456 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 GPR176Q14439 515 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 RSBN1Q5VWQ0 802 aaPredicted RBP18.58■□□□□ 0.56
PRDM4-205ENST00000550376 AKAP14Q86UN6 197 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 DND1Q8IYX4 353 aaKnown RBP18.58■□□□□ 0.56
PRDM4-205ENST00000550376 LRRC18Q8N456 261 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 SOX7Q9BT81 388 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 MFRPQ9BY79 579 aa18.58■□□□□ 0.56
PRDM4-205ENST00000550376 RBFOX1Q9NWB1 397 aaKnown RBP18.58■□□□□ 0.56
PRDM4-205ENST00000550376 NCOA6Q14686 2063 aaPredicted RBP18.57■□□□□ 0.56
PRDM4-205ENST00000550376 LOC107986453A0A1B0GWG9 222 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 NPIPA2E9PIF3 369 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 NPIPA3F8WFD2 350 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 ITGA5P08648 1049 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 PTBP1P26599 531 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRDM4-205ENST00000550376 EFNB2P52799 333 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 DMRTC1Q5HYR2 192 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 UBE2NLQ5JXB2 153 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 AGAP6Q5VW22 663 aa18.57■□□□□ 0.56
PRDM4-205ENST00000550376 PYHIN1Q6K0P9 492 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms