RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 AGBL2Q5U5Z8 902 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 GPR107Q5VW38 600 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 C12orf56Q8IXR9 622 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 COMMD1Q8N668 190 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 Q8N9L7 120 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 OR52E5Q8NH55 327 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 OR5K2Q8NHB8 316 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 ZNF596Q8TC21 504 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 LKAAEAR1Q8TD35 194 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 PEX13Q92968 403 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 FAM104AQ969W3 186 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 IFI27L2Q9H2X8 130 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 TPK1Q9H3S4 243 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 ELOVL6Q9H5J4 265 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 NOX3Q9HBY0 568 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 ACP6Q9NPH0 428 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 MRPL22Q9NWU5 206 aaKnown RBP2.63□□□□□ -1.99
VPS29-205ENST00000548539 CLN8Q9UBY8 286 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 MN1Q10571 1320 aaPredicted RBP2.63□□□□□ -1.99
VPS29-205ENST00000548539 MAPK8IP3Q9UPT6 1336 aa2.63□□□□□ -1.99
VPS29-205ENST00000548539 IGLV1-36A0A0B4J1U3 117 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 TRAV25A0A0B4J276 109 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 ANKRD63C9JTQ0 380 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 K7EMT4 169 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 L7N2F9 121 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 AKR7A2O43488 359 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 FLOT1O75955 427 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 TLX1NBP0CAT3 122 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 UBTFL6P0CB48 400 aaPredicted RBP2.62□□□□□ -1.99
VPS29-205ENST00000548539 STAG3L3P0CL85 134 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 ZNF823P16415 610 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 RAB3BP20337 219 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 F2RP25116 425 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 RPS9P46781 194 aaKnown RBP2.62□□□□□ -1.99
VPS29-205ENST00000548539 ERCC8Q13216 396 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 XKR4Q5GH76 650 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 Q6P435 159 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 ARL9Q6T311 187 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 ZFP2Q6ZN57 461 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 TMCO2Q7Z6W1 182 aaPredicted RBP2.62□□□□□ -1.99
VPS29-205ENST00000548539 LINC01551Q86U37 167 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 OR10G4Q8NGN3 311 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 CHAC1Q9BUX1 264 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 IQCGQ9H095 443 aaKnown RBP2.62□□□□□ -1.99
VPS29-205ENST00000548539 NCOR1P1Q9H4R4 102 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 CRLF2Q9HC73 371 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 LYRM4Q9HD34 91 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 ISYNA1Q9NPH2 558 aa2.62□□□□□ -1.99
VPS29-205ENST00000548539 TRMT112Q9UI30 125 aaKnown RBP2.62□□□□□ -1.99
VPS29-205ENST00000548539 COL4A4P53420 1690 aaPredicted RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 CAMTA1Q9Y6Y1 1673 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 IGHV3-74A0A0B4J1X5 117 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 IGHV3-66A0A0C4DH42 116 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 NCBP2LA6PVI3 153 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 H0YIV9 168 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 M0R3G1 203 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 RAD51CO43502 376 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 ENTPD5O75356 428 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 FCN3O75636 299 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 FGFR1OPO95684 399 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 HLA-DPB1P04440 258 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 IFNW1P05000 195 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 CLTAP09496 248 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 UBCP0CG48 685 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 CSNK2A2P19784 350 aaPredicted RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 CSNK1A1P48729 337 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 PPOXP50336 477 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 RAB7AP51149 207 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 RAP1AP62834 184 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 ZNF266Q14584 549 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 PTGES3Q15185 160 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 DEFB116Q30KQ4 102 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 THEM4Q5T1C6 240 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 METTL21CQ5VZV1 264 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 CEMP1Q6PRD7 247 aaPredicted RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 SPESP1Q6UW49 350 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 FBXW12Q6X9E4 464 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 FAM92BQ6ZTR7 304 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 Q6ZVH6 145 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 MRPL55Q7Z7F7 128 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 JAGN1Q8N5M9 183 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 FAM86B1Q8N7N1 296 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 OR10AD1Q8NGE0 317 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 OR56A4Q8NGH8 313 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 APH1BQ8WW43 257 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 TMEM230Q96A57 120 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 SDHCQ99643 169 aaPredicted RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 ZYG11BQ9C0D3 744 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 LINC00597Q9H2U6 94 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 TMEM38AQ9H6F2 299 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 EDA2RQ9HAV5 297 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 MRPS30Q9NP92 439 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 ZDHHC4Q9NPG8 344 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 RPRD1BQ9NQG5 326 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 PXMP2Q9NR77 195 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 MYEF2Q9P2K5 600 aaKnown RBP2.61□□□□□ -1.99
VPS29-205ENST00000548539 TBX21Q9UL17 535 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 PSME2Q9UL46 239 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 KCNE3Q9Y6H6 103 aa2.61□□□□□ -1.99
VPS29-205ENST00000548539 COL16A1Q07092 1604 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms