RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 CA10Q9NS85 328 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 PLXNB1O43157 2135 aa11.92□□□□□ -0.5
PTCH1-217ENST00000548420 AHCYL1O43865 530 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 KRT36O76013 467 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 UBOX5O94941 541 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 NDUFB2O95178 105 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 SLC2A10O95528 541 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 SERPINA5P05154 406 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 GAAP10253 952 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 NR2C1P13056 603 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 CAPZA2P47755 286 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 GIPRP48546 466 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF84P51523 738 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 ERVK-25P63136 954 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 PIGFQ07326 219 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 TRAP1Q12931 704 aaKnown RBP11.91□□□□□ -0.5
PTCH1-217ENST00000548420 C1orf94Q6P1W5 598 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 DOK3Q7L591 496 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF584Q8IVC4 421 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 OR51F2Q8NH61 342 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 FAM110DQ8TAY7 271 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-217ENST00000548420 TMIGD2Q96BF3 282 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 ASB9Q96DX5 294 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 CLPTM1LQ96KA5 538 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF48Q96MX3 618 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-217ENST00000548420 RBP7Q96R05 134 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 SH3GL3Q99963 347 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 KCNS3Q9BQ31 491 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 SIAEQ9HAT2 523 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 FBXL3Q9UKT7 428 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 ADAM18Q9Y3Q7 739 aa11.91□□□□□ -0.5
PTCH1-217ENST00000548420 TRAV20A0A0B4J274 112 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 UNC119BA6NIH7 251 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 FARS2O95363 451 aaKnown RBP11.9□□□□□ -0.5
PTCH1-217ENST00000548420 TXNDC12O95881 172 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-217ENST00000548420 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 NPR2P20594 1047 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 NR4A1P22736 598 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 RRM2P31350 389 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 GSSP48637 474 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 LMO4P61968 165 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 SPIBQ01892 262 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 COL10A1Q03692 680 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 FMODQ06828 376 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 NPRL3Q12980 569 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 TOP3AQ13472 1001 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-217ENST00000548420 EFNB3Q15768 340 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 ADIPOQQ15848 244 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 SAMD5Q5TGI4 173 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 FAM27BQ5VT28 67 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 GPR139Q6DWJ6 353 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 DPY19L2P2Q6ZN68 376 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 CLDN22Q8N7P3 220 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 OR4C15Q8NGM1 316 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 RSRC1Q96IZ7 334 aaKnown RBP11.9□□□□□ -0.5
PTCH1-217ENST00000548420 Q96M85 177 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 THTPAQ9BU02 230 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 TRIM15Q9C019 465 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 KRCC1Q9NPI7 259 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-217ENST00000548420 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 AURKCQ9UQB9 309 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 LYVE1Q9Y5Y7 322 aa11.9□□□□□ -0.5
PTCH1-217ENST00000548420 TMEM129A0AVI4 362 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 SLC22A23A1A5C7 686 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 TIMM23O14925 209 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 KNG1P01042 644 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 FPR3P25089 353 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 SDHAP31040 664 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 CDAP32320 146 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 RPL4P36578 427 aaKnown RBP11.89□□□□□ -0.51
PTCH1-217ENST00000548420 SERPINF1P36955 418 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 PTDSS1P48651 473 aaKnown RBP11.89□□□□□ -0.51
PTCH1-217ENST00000548420 CD47Q08722 323 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 RAB39AQ14964 217 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 MESTQ5EB52 335 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 ZNF770Q6IQ21 691 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-217ENST00000548420 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 BCL6BQ8N143 479 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-217ENST00000548420 NANPQ8TBE9 248 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 UBASH3BQ8TF42 649 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 GRHPRQ9UBQ7 328 aa11.89□□□□□ -0.51
PTCH1-217ENST00000548420 PRSS37A4D1T9 235 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 B9A039 149 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 ARPC3O15145 178 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 RAB36O95755 333 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 OR4A8P0C604 315 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 FPR2P25090 351 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 THBS4P35443 961 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 IFNGR2P38484 337 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 PPOXP50336 477 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 BNIP1Q12981 228 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 TSPAN31Q12999 210 aa11.88□□□□□ -0.51
PTCH1-217ENST00000548420 RFX4Q33E94 735 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms