RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 BHLHA15Q7RTS1 189 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 SSX8Q7RTT4 187 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 FAM220AQ7Z4H9 259 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 LHFPL3Q86UP9 236 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 P2RY8Q86VZ1 359 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 CXorf67Q86X51 503 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 SYS1Q8N2H4 156 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 NANOGP1Q8N7R0 232 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 OR52N5Q8NH56 324 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 SGCDQ92629 289 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 CCDC120Q96HB5 630 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 SH3GL3Q99963 347 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 ABHD6Q9BV23 337 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 MROQ9BYG7 248 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 GDF2Q9UK05 429 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 KMT2BQ9UMN6 2715 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-203ENST00000547063 NBASA2RRP1 2371 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ZFYVE26Q68DK2 2539 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 A0A096LPE4 126 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 A0A1W2PPZ6 126 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 TRIM64CA6NLI5 447 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF254O75437 659 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 RAD51DO75771 328 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 LYZL6O75951 148 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 CLPTM1O96005 669 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 MT-ND5P03915 603 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 AGAP20933 346 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 CD79BP40259 229 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ASCL1P50553 236 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 HCCSP53701 268 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 WNT4P56705 351 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 HIST1H3AP68431 136 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ROM1Q03395 351 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF85Q03923 595 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ECH1Q13011 328 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 MRPL28Q13084 256 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 CDONQ4KMG0 1287 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 HIST2H3PS2Q5TEC6 136 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 HIST2H3AQ71DI3 136 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 KRT77Q7Z794 578 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 LINC00346Q8IVM7 164 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 SKA3Q8IX90 412 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF679Q8IYX0 411 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ALDH16A1Q8IZ83 802 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 RELL2Q8NC24 303 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 STEAP2Q8NFT2 490 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 LILRB4Q8NHJ6 448 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ST7LQ8TDW4 575 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 RNF133Q8WVZ7 376 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 HDHD2Q9H0R4 259 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 OR10A4Q9H209 315 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 NIPAL2Q9H841 368 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 RNF121Q9H920 327 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 IKZF2Q9UKS7 526 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 FBXL3Q9UKT7 428 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 COPS3Q9UNS2 423 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 SLC5A6Q9Y289 635 aa13.87□□□□□ -0.19
TRAFD1-203ENST00000547063 ARPC4-TTLL3A0A0A6YYG9 625 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 METTL15A6NJ78 407 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF878C9JN71 531 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 SGCEO43556 437 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 WNT11O96014 354 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 ATP6V1B1P15313 513 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 RPS27P42677 84 aaKnown RBP13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 UQCRFS1P47985 274 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 ADORA2A-AS1P86434 159 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 EMX1Q04741 257 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 PLP2Q04941 152 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 RAB35Q15286 201 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 SPHARQ15513 63 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 FBXL19-AS1Q494R0 122 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 XKRXQ6PP77 449 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 CORO6Q6QEF8 472 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 STAC2Q6ZMT1 411 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 LIX1LQ8IVB5 337 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 CA5BP1Q8WTZ4 195 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 SMAP2Q8WU79 429 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 HTRA1Q92743 480 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 RORBQ92753 470 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 SLAMF6Q96DU3 332 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 FBXO17Q96EF6 278 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 OR8B4Q96RC9 309 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 ACOT13Q9NPJ3 140 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 PLEK2Q9NYT0 353 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 ATPIF1Q9UII2 106 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 AMDHD2Q9Y303 409 aa13.86□□□□□ -0.19
TRAFD1-203ENST00000547063 C16orf97H3BN30 126 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 RER1O15258 196 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 PTHP01270 115 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 APOC1P02654 83 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 H2BFMP0C1H6 154 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 CD79AP11912 226 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 ZNF32P17041 273 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 PCMT1P22061 227 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 DCTDP32321 178 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 RIDAP52758 137 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 NR1H2P55055 460 aa13.85□□□□□ -0.19
TRAFD1-203ENST00000547063 TAS2R43P59537 309 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms