RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CRABP1P29762 137 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 CDKN2AP42771 156 aaKnown RBP5.53□□□□□ -1.52
PRKDC-211ENST00000546304 ARF1P84077 181 aaKnown RBP5.53□□□□□ -1.52
PRKDC-211ENST00000546304 CDK5Q00535 292 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SLC34A1Q06495 639 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 NPRL3Q12980 569 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 RIPK1Q13546 671 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SNTB1Q13884 538 aaKnown RBP5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PTGES3Q15185 160 aaKnown RBP5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TAB1Q15750 504 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 GABRA6Q16445 453 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TBRG1Q3YBR2 411 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 NRN1LQ496H8 165 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 HIKESHIQ53FT3 197 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TIMM23BQ5SRD1 257 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 THEM4Q5T1C6 240 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SLX4IPQ5VYV7 408 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TMEM236Q5W0B7 351 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 LPCAT4Q643R3 524 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 C12orf73Q69YU5 71 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 OR7E24Q6IFN5 339 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 ANKRD16Q6P6B7 361 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SLC25A47Q6Q0C1 308 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TEPPQ6URK8 271 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 MEX3BQ6ZN04 569 aaKnown RBP5.53□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF813Q6ZN06 617 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF627Q7L945 461 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PACRGLQ8N7B6 248 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SLC37A3Q8NCC5 494 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 NPEPL1Q8NDH3 523 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PROKR2Q8NFJ6 384 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 OR9Q1Q8NGQ5 310 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 HTRA1Q92743 480 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PLEKHA8Q96JA3 519 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 RDH12Q96NR8 316 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TSSK2Q96PF2 358 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 RBP7Q96R05 134 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 MBOAT4Q96T53 435 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PITX2Q99697 317 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SLC29A1Q99808 456 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 JAM3Q9BX67 310 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 HDHD5Q9BXW7 423 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 TOR3AQ9H497 397 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 RERGLQ9H628 205 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 SMPD3Q9NY59 655 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-211ENST00000546304 ASH2LQ9UBL3 628 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 PLEKHB1Q9UF11 243 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-211ENST00000546304 UGT2A1Q9Y4X1 527 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 FKBP7Q9Y680 259 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
PRKDC-211ENST00000546304 CCDC168Q8NDH2 2452 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 CSMD1Q96PZ7 3565 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 ARPC4-TTLL3A0A0A6YYG9 625 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 A0A1W2PR80 420 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 FAM183AA6NL82 134 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 DCTN6O00399 190 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 PRKYO43930 277 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SLC16A7O60669 478 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 KHDRBS3O75525 346 aaKnown RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 FARS2O95363 451 aaKnown RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SNAP29O95721 258 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 GAAP10253 952 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 COX6B1P14854 86 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SPI1P17947 270 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 MSR1P21757 451 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 CDAP32320 146 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 GGT2P36268 569 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 POLR2IP36954 125 aaKnown RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 KIR2DL3P43628 341 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 CAPZA2P47755 286 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SLC25A1P53007 311 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 CDC42P60953 191 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 UBE2NP61088 152 aaKnown RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 TUBA1BP68363 451 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 TUBA4AP68366 448 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 MRPS34P82930 218 aaKnown RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 GLO1Q04760 184 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 DBPQ10586 325 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 PPA1Q15181 289 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SNAPC1Q16533 368 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 ZIK1Q3SY52 487 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 C4orf46Q504U0 113 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF362Q5T0B9 420 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-211ENST00000546304 ACSM5Q6NUN0 579 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 PLBD1Q6P4A8 553 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 FOXL2NBQ6ZUU3 175 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 TUBA1AQ71U36 451 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SSX8Q7RTT4 187 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 ZBTB46Q86UZ6 589 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 P2RY8Q86VZ1 359 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 GLB1L2Q8IW92 636 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 OR6V1Q8N148 313 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 GALNT4Q8N4A0 578 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 SLC22A24Q8N4F4 322 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 OR6K6Q8NGW6 343 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 OR2T4Q8NH00 348 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 OR52N5Q8NH56 324 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 LINC01560Q8TB33 94 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 FAM81AQ8TBF8 368 aa5.52□□□□□ -1.53
PRKDC-211ENST00000546304 FAM222BQ8WU58 562 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms