RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 DCAF13Q9NV06 445 aaKnown RBP16.93■□□□□ 0.3
CHD4-213ENST00000545584 SIGLEC7Q9Y286 467 aa16.93■□□□□ 0.3
CHD4-213ENST00000545584 CUBNO60494 3623 aa16.93■□□□□ 0.3
CHD4-213ENST00000545584 TEX13CA0A0J9YWL9 993 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 SGCEO43556 437 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 DOK2O60496 412 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 ICMTO60725 284 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 PTP4A3O75365 173 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 KHDRBS3O75525 346 aaKnown RBP16.92■□□□□ 0.3
CHD4-213ENST00000545584 NGFP01138 241 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 IGHV1-46P01743 117 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 ZNF26P17031 533 aaPredicted RBP16.92■□□□□ 0.3
CHD4-213ENST00000545584 GSTM3P21266 225 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 HTR5AP47898 357 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 MMP15P51511 669 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 LMO4P61968 165 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 SLC3A1Q07837 685 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 SHQ1Q6PI26 577 aaKnown RBP16.92■□□□□ 0.3
CHD4-213ENST00000545584 RNF148Q8N7C7 305 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 NPEPL1Q8NDH3 523 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 RASD2Q96D21 266 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 RSRC1Q96IZ7 334 aaKnown RBP16.92■□□□□ 0.3
CHD4-213ENST00000545584 LRRC37BQ96QE4 947 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 DIRC2Q96SL1 478 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 RERGLQ9H628 205 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 METRNQ9UJH8 293 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 ZDHHC8Q9ULC8 765 aa16.92■□□□□ 0.3
CHD4-213ENST00000545584 TRAV20A0A0B4J274 112 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 TCF21O43680 179 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 TIMM8AO60220 97 aaPredicted RBP16.91■□□□□ 0.3
CHD4-213ENST00000545584 SNX3O60493 162 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 SLC16A7O60669 478 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 SCG5P05408 212 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 CTLA4P16410 223 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 TUBG1P23258 451 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 OMPP47874 163 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 LIMS1P48059 325 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 RPS6KA3P51812 740 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 SMIM11AP58511 58 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 AQP6Q13520 282 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 ACSM5Q6NUN0 579 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 DPY19L2P2Q6ZN68 376 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 ADCK1Q86TW2 530 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 OR52J3Q8NH60 311 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 CCL17Q92583 94 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 C7orf34Q96L11 122 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 GPX7Q96SL4 187 aaPredicted RBP16.91■□□□□ 0.3
CHD4-213ENST00000545584 C19orf24Q9BVV8 132 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 SYT4Q9H2B2 425 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 ZNF665Q9H7R5 613 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 GORASP2Q9H8Y8 452 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 NRIP3Q9NQ35 241 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 TUBG2Q9NRH3 451 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 TBCCD1Q9NVR7 557 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 PLEK2Q9NYT0 353 aa16.91■□□□□ 0.3
CHD4-213ENST00000545584 TRBV4-1A0A0J9YWV2 114 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 UNC119BA6NIH7 251 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 ZSCAN5BA6NJL1 495 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 SOCS2O14508 198 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 DIRAS1O95057 198 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 SRSF2Q01130 221 aaKnown RBP16.9■□□□□ 0.3
CHD4-213ENST00000545584 SCGB2A2Q13296 93 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 MTX3Q5HYI7 312 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 PEG10Q86TG7 708 aaKnown RBP16.9■□□□□ 0.3
CHD4-213ENST00000545584 GLB1L2Q8IW92 636 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 TEX29Q8N6K0 151 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 MCUR1Q96AQ8 359 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 COG8Q96MW5 612 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 MAGEL2Q9UJ55 1249 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 COA3Q9Y2R0 106 aaPredicted RBP16.9■□□□□ 0.3
CHD4-213ENST00000545584 WIPI2Q9Y4P8 454 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 IER3IP1Q9Y5U9 82 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 V9GYQ6 96 aa16.9■□□□□ 0.3
CHD4-213ENST00000545584 ADH4P08319 380 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 LSM6P62312 80 aaKnown RBP16.89■□□□□ 0.29
CHD4-213ENST00000545584 SEC23BQ15437 767 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 FAHD2BQ6P2I3 314 aaPredicted RBP16.89■□□□□ 0.29
CHD4-213ENST00000545584 DNM1P34Q6PK57 102 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 THSD4Q6ZMP0 1018 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 VASH1Q7L8A9 365 aaPredicted RBP16.89■□□□□ 0.29
CHD4-213ENST00000545584 FAM86B1Q8N7N1 296 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 FAHD2AQ96GK7 314 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 PYURFQ96I23 114 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 DHRS1Q96LJ7 313 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 METTL17Q9H7H0 456 aaPredicted RBP16.89■□□□□ 0.29
CHD4-213ENST00000545584 VSX1Q9NZR4 365 aaPredicted RBP16.89■□□□□ 0.29
CHD4-213ENST00000545584 IL20RAQ9UHF4 553 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 KLHL21Q9UJP4 597 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 POLR1DQ9Y2S0 133 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 CACNG2Q9Y698 323 aa16.89■□□□□ 0.29
CHD4-213ENST00000545584 GADD45GO95257 159 aa16.88■□□□□ 0.29
CHD4-213ENST00000545584 MPZL1O95297 269 aa16.88■□□□□ 0.29
CHD4-213ENST00000545584 TNFSF4P23510 183 aa16.88■□□□□ 0.29
CHD4-213ENST00000545584 CENPAP49450 140 aa16.88■□□□□ 0.29
CHD4-213ENST00000545584 TNFAIP6P98066 277 aaPredicted RBP16.88■□□□□ 0.29
CHD4-213ENST00000545584 SPIBQ01892 262 aa16.88■□□□□ 0.29
CHD4-213ENST00000545584 PSG7Q13046 419 aa16.88■□□□□ 0.29
CHD4-213ENST00000545584 TMEM255AQ5JRV8 349 aa16.88■□□□□ 0.29
CHD4-213ENST00000545584 SAMD4BQ5PRF9 694 aaKnown RBP16.88■□□□□ 0.29
CHD4-213ENST00000545584 SMARCD3Q6STE5 483 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms