RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 USP43Q70EL4 1123 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 VASH1Q7L8A9 365 aaPredicted RBP14.01□□□□□ -0.17
XRCC1-202ENST00000543982 SYS1Q8N2H4 156 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 UBE2J2Q8N2K1 259 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 FNDC8Q8TC99 324 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 MRPL48Q96GC5 212 aaKnown RBP14.01□□□□□ -0.17
XRCC1-202ENST00000543982 ABHD6Q9BV23 337 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 DCSTAMPQ9H295 470 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 TMEM38BQ9NVV0 291 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 SLCO1C1Q9NYB5 712 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 CYB5R1Q9UHQ9 305 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 MRM2Q9UI43 246 aaKnown RBP14.01□□□□□ -0.17
XRCC1-202ENST00000543982 SSR3Q9UNL2 185 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 GRIP1Q9Y3R0 1128 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 SHANK1Q9Y566 2161 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 COL6A6A6NMZ7 2263 aa14.01□□□□□ -0.17
XRCC1-202ENST00000543982 VGLL3A8MV65 326 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 PRRG2O14669 202 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 HRGP04196 525 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 B4GALT1P15291 398 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 CEACAM8P31997 349 aaPredicted RBP14□□□□□ -0.17
XRCC1-202ENST00000543982 DCXRQ7Z4W1 244 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 KBTBD8Q8NFY9 601 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 ST7LQ8TDW4 575 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 SNX33Q8WV41 574 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 FBXO17Q96EF6 278 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 BBC3Q96PG8 261 aaPredicted RBP14□□□□□ -0.17
XRCC1-202ENST00000543982 MNTQ99583 582 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 TM9SF2Q99805 663 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 EXOSC4Q9NPD3 245 aaKnown RBP14□□□□□ -0.17
XRCC1-202ENST00000543982 GLRX2Q9NS18 164 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 ZNF670-ZNF695F2Z2N8 137 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 RPL36A-HNRNPH2H7BZ11 118 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 RER1O15258 196 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 KRT33AO76009 404 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 ABHD16AO95870 558 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 IL18BPO95998 194 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 ITGA5P08648 1049 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 OR8G3PP0DMU2 310 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 ZNF823P16415 610 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 TAS2R43P59537 309 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 EIF2B1Q14232 305 aaKnown RBP14□□□□□ -0.17
XRCC1-202ENST00000543982 TEX30Q5JUR7 227 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 FBXW9Q5XUX1 488 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 SLC18B1Q6NT16 456 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 TMEM203Q969S6 136 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 FOXB1Q99853 325 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 OPN3Q9H1Y3 402 aaPredicted RBP14□□□□□ -0.17
XRCC1-202ENST00000543982 NELFAQ9H3P2 528 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 RNF167Q9H6Y7 350 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 ASH2LQ9UBL3 628 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 LAMP5Q9UJQ1 280 aa14□□□□□ -0.17
XRCC1-202ENST00000543982 DOCK7Q96N67 2140 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 A0A096LPE4 126 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 A0A1W2PPZ6 126 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 ZNF503-AS2A6NEH8 195 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 TMIGD3P0DMS9 266 aaPredicted RBP13.99□□□□□ -0.17
XRCC1-202ENST00000543982 TIMP3P35625 211 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 PSMB10P40306 273 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 PER3P56645 1201 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 RPS25P62851 125 aaKnown RBP13.99□□□□□ -0.17
XRCC1-202ENST00000543982 MRPS34P82930 218 aaKnown RBP13.99□□□□□ -0.17
XRCC1-202ENST00000543982 MRPL49Q13405 166 aaKnown RBP13.99□□□□□ -0.17
XRCC1-202ENST00000543982 TSC22D1Q15714 1073 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 DGUOKQ16854 277 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 CD200R1LQ6Q8B3 271 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 KLHL24Q6TFL4 600 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 LRRN1Q6UXK5 716 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 SKA3Q8IX90 412 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 ZNF610Q8N9Z0 462 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 PELI1Q96FA3 418 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 WBP1Q96G27 269 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 TP63Q9H3D4 680 aaPredicted RBP13.99□□□□□ -0.17
XRCC1-202ENST00000543982 ACOXLQ9NUZ1 547 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 ZNF224Q9NZL3 707 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 UPB1Q9UBR1 384 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 POLEQ07864 2286 aa13.99□□□□□ -0.17
XRCC1-202ENST00000543982 CACNA1CQ13936 2221 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 MSR1P21757 451 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 ANOS1P23352 680 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 PTGER4P35408 488 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 EGFL6Q8IUX8 553 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 HSD17B8Q92506 261 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 TRMT61AQ96FX7 289 aaKnown RBP13.98□□□□□ -0.17
XRCC1-202ENST00000543982 COQ7Q99807 217 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 PNRC2Q9NPJ4 139 aaKnown RBP13.98□□□□□ -0.17
XRCC1-202ENST00000543982 PLSCR4Q9NRQ2 329 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 TXNL4BQ9NX01 149 aaKnown RBP13.98□□□□□ -0.17
XRCC1-202ENST00000543982 MALT1Q9UDY8 824 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 GDF2Q9UK05 429 aaPredicted RBP13.98□□□□□ -0.17
XRCC1-202ENST00000543982 EMC9Q9Y3B6 208 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 TMEM14AQ9Y6G1 99 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 A0A0G2JNJ9 132 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 PLPP2O43688 288 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 CLPXO76031 633 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 HLA-DPB1P04440 258 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 CD53P19397 219 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 IGHV1-2P23083 117 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 ZNF84P51523 738 aa13.98□□□□□ -0.17
XRCC1-202ENST00000543982 FAM27BQ5VT28 67 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms