RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 ZNF503-AS2A6NEH8 195 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 CCDC182A6NF36 153 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 DPRXA6NFQ7 191 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 TVP23AA6NH52 213 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 M0R1B8 84 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 PHYHO14832 338 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 SCG5P05408 212 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 APLNRP35414 380 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 IDH3GP51553 393 aaPredicted RBP10.59□□□□□ -0.71
DDX55-210ENST00000543016 NUDT6P53370 316 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 AQP4P55087 323 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 TUBA1BP68363 451 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 TUBA4AP68366 448 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 IL5RAQ01344 420 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 RAB35Q15286 201 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 TBC1D28Q2M2D7 210 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 PABPC1L2AQ5JQF8 200 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 ALKBH2Q6NS38 261 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 SLC18B1Q6NT16 456 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 ARL9Q6T311 187 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 USP51Q70EK9 711 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 TUBA1AQ71U36 451 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 SLC16A9Q7RTY1 509 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 ENTHD1Q8IYW4 607 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
DDX55-210ENST00000543016 BBS1Q8NFJ9 593 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 OR4F15Q8NGB8 312 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 FGFBP3Q8TAT2 258 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 ZNRF4Q8WWF5 429 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 ZMYND19Q96E35 227 aaPredicted RBP10.59□□□□□ -0.71
DDX55-210ENST00000543016 PLPPR2Q96GM1 343 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 FOXN4Q96NZ1 517 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 DCLRE1CQ96SD1 692 aaKnown RBP10.59□□□□□ -0.71
DDX55-210ENST00000543016 CNN2Q99439 309 aaKnown RBP10.59□□□□□ -0.71
DDX55-210ENST00000543016 COQ7Q99807 217 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 TMEM204Q9BSN7 226 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 WDR76Q9H967 626 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 PLEK2Q9NYT0 353 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 RAB26Q9ULW5 256 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 RPL36Q9Y3U8 105 aaKnown RBP10.59□□□□□ -0.71
DDX55-210ENST00000543016 RNF115Q9Y4L5 304 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 SPEF1Q9Y4P9 236 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 LHFPL6Q9Y693 200 aa10.59□□□□□ -0.71
DDX55-210ENST00000543016 PRR14LQ5THK1 2151 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 IGHV1-18A0A0C4DH31 117 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 IRGMA1A4Y4 181 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 OR6C6A6NF89 314 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 VSTM5A8MXK1 200 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 CTAG2O75638 210 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 SPARCP09486 303 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 CECR9P0C854 216 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 PATE4P0C8F1 98 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 TUBG1P23258 451 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 STOMP27105 288 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 SLC15A1P46059 708 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 MTNR1AP48039 350 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 GDI2P50395 445 aaKnown RBP10.58□□□□□ -0.72
DDX55-210ENST00000543016 ISL1P61371 349 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 CSNK2BP67870 215 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 NAAAQ02083 359 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 BSPH1Q075Z2 132 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 RAB39AQ14964 217 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 MAD2L1BPQ15013 274 aaPredicted RBP10.58□□□□□ -0.72
DDX55-210ENST00000543016 MEP1BQ16820 701 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 ELFN2Q5R3F8 820 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 FBXW10Q5XX13 1052 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 ADAM5Q6NVV9 412 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 IZUMO2Q6UXV1 221 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 VASH1Q7L8A9 365 aaPredicted RBP10.58□□□□□ -0.72
DDX55-210ENST00000543016 THAP5Q7Z6K1 395 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 EGFL6Q8IUX8 553 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 ERI1Q8IV48 349 aaKnown RBP10.58□□□□□ -0.72
DDX55-210ENST00000543016 SLC30A7Q8NEW0 376 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 OR6N2Q8NGY6 317 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 OR1F12Q8NHA8 337 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 OTOSQ8NHW6 89 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 ASB17Q8WXJ9 295 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 HTRA1Q92743 480 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 UBE2FQ969M7 185 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 PIK3IP1Q96FE7 263 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 C1QTNF6Q9BXI9 259 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 WNT5BQ9H1J7 359 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 Q9H521 79 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 TUBG2Q9NRH3 451 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 RASSF1Q9NS23 344 aa10.58□□□□□ -0.72
DDX55-210ENST00000543016 GDF2Q9UK05 429 aaPredicted RBP10.58□□□□□ -0.72
DDX55-210ENST00000543016 CADP27708 2225 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 J3QW42 95 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 M0R129 80 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 RER1O15258 196 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 SYNGR3O43761 229 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 DOK2O60496 412 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 ICMTO60725 284 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 ENTPD6O75354 484 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 GPANK1O95872 356 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 APOC1P02654 83 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 SBK2P0C263 348 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 OR2T7P0C7T2 308 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 ZNF35P13682 527 aa10.57□□□□□ -0.72
DDX55-210ENST00000543016 LOXP28300 417 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms