RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 KLHL26Q53HC5 615 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 LY6G6FQ5SQ64 297 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 FAM122BQ7Z309 247 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 CLEC1AQ8NC01 280 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 PPP1R1CQ8WVI7 109 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
CNOT9-208ENST00000542068 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 MFRPQ9BY79 579 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 RTN4RQ9BZR6 473 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 CENPMQ9NSP4 180 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 TAS2R8Q9NYW2 309 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 PCDH15Q96QU1 1955 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 LOC100289279A0A1B0GTE1 492 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 C5orf51A6NDU8 294 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 RFPL4AA6NLU0 287 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 TMEM212A6NML5 194 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 RFPL4AL1F8VTS6 287 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 FADS1O60427 444 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 LDOC1O95751 146 aaPredicted RBP13.8□□□□□ -0.2
CNOT9-208ENST00000542068 DNASE1L1P49184 302 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 RAB30Q15771 203 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 RTN4RL2Q86UN3 420 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 PAQR8Q8TEZ7 354 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 ASB12Q8WXK4 309 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 SEH1LQ96EE3 360 aa13.8□□□□□ -0.2
CNOT9-208ENST00000542068 ZNF254O75437 659 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 UTS2O95399 124 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 ELOCQ15369 112 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 EXOSC6Q5RKV6 272 aaKnown RBP13.79□□□□□ -0.2
CNOT9-208ENST00000542068 ATPAF1Q5TC12 328 aaPredicted RBP13.79□□□□□ -0.2
CNOT9-208ENST00000542068 WBP2NLQ6ICG8 309 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 CORO6Q6QEF8 472 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 OR2W3Q7Z3T1 314 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 HSD17B13Q7Z5P4 300 aaPredicted RBP13.79□□□□□ -0.2
CNOT9-208ENST00000542068 CBLN2Q8IUK8 224 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 OR1S2Q8NGQ3 325 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 NUDCD2Q8WVJ2 157 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 ZBTB8AQ96BR9 441 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 CYYR1Q96J86 154 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 OR11A1Q9GZK7 315 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 EMC9Q9Y3B6 208 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 HS3ST3A1Q9Y663 406 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 ICOSLGO75144 302 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 LTBRP36941 435 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 GNALP38405 381 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 FBXW4P57775 412 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 ZNF141Q15928 474 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 OR6K3Q8NGY3 331 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 C15orf40Q8WUR7 153 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 CCDC107Q8WV48 283 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 SPACA5Q96QH8 159 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 MESP1Q9BRJ9 268 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 POTEKPQ9BYX7 375 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 NKX6-2Q9C056 277 aaPredicted RBP13.79□□□□□ -0.2
CNOT9-208ENST00000542068 MRPS18BQ9Y676 258 aaKnown RBP13.79□□□□□ -0.2
CNOT9-208ENST00000542068 NAXDQ8IW45 347 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 LMF2Q9BU23 707 aaKnown RBP13.79□□□□□ -0.2
CNOT9-208ENST00000542068 FOXQ1Q9C009 403 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 POLE3Q9NRF9 147 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 UBQLN4Q9NRR5 601 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 MLXQ9UH92 298 aa13.79□□□□□ -0.2
CNOT9-208ENST00000542068 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 ZNF264O43296 627 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 HTR2CP28335 458 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 TAS2R19P59542 299 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 RPS4XP62701 263 aaKnown RBP13.78□□□□□ -0.2
CNOT9-208ENST00000542068 ZNF595Q8IYB9 648 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 CKLFQ9UBR5 152 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 VDAC3Q9Y277 283 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 HIF3AQ9Y2N7 669 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 CD38P28907 300 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 CSF2RBP32927 897 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 GPR3P46089 330 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 PLCXD2Q0VAA5 305 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 GUCA2BQ16661 112 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 PDSS1Q5T2R2 415 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 ASPHD2Q6ICH7 369 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 ATG4DQ86TL0 474 aaPredicted RBP13.78□□□□□ -0.2
CNOT9-208ENST00000542068 ZFP82Q8N141 532 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 OR2S2Q9NQN1 319 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 PCDHB10Q9UN67 800 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 TMED7Q9Y3B3 224 aa13.78□□□□□ -0.2
CNOT9-208ENST00000542068 TRBV5-7A0A0A0MS05 114 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 LOC101059948A0A1B0GTJ6 334 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 TMEM225Q6GV28 225 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 ZNF584Q8IVC4 421 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 FOXRED2Q8IWF2 684 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 CLRN3Q8NCR9 226 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 OR13C3Q8NGS6 347 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 GPR119Q8TDV5 335 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 C2CD4CQ8TF44 421 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 SLC41A2Q96JW4 573 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 C8orf33Q9H7E9 229 aaPredicted RBP13.77□□□□□ -0.2
CNOT9-208ENST00000542068 CUTCQ9NTM9 273 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 UPB1Q9UBR1 384 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 PRODH2Q9UF12 536 aa13.77□□□□□ -0.2
CNOT9-208ENST00000542068 CD1AP06126 327 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 RPA2P15927 270 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 PI3P19957 117 aa13.77□□□□□ -0.21
CNOT9-208ENST00000542068 BDKRB2P30411 391 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms