RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 RASSF1Q9NS23 344 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 ZNF224Q9NZL3 707 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 ASH2LQ9UBL3 628 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 CYB5R1Q9UHQ9 305 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 F8P00451 2351 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 OR6C6A6NF89 314 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 CTAG2O75638 210 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 TFP02787 698 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 ZNF14P17017 642 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 SLC2A5P22732 501 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 PCSK6P29122 969 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 HTR1FP30939 366 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 PYCR1P32322 319 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 IDH3GP51553 393 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 CDH11P55287 796 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 RPS23P62266 143 aaKnown RBP15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 PIGFQ07326 219 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 APOFQ13790 326 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 GGTLC2Q14390 218 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 RAB35Q15286 201 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 LINC01590Q5TEZ4 76 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 ALKBH2Q6NS38 261 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 C8orf59Q8N0T1 100 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 RHOXF1Q8NHV9 184 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 FBXO17Q96EF6 278 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 PIK3IP1Q96FE7 263 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 MRPL48Q96GC5 212 aaKnown RBP15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 SP140LQ9H930 580 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 CDH20Q9HBT6 801 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 FAIMQ9NVQ4 179 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 PLEK2Q9NYT0 353 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 EIF3KQ9UBQ5 218 aaKnown RBP15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 COMMD3-BMI1R4GMX3 469 aa15.24■□□□□ 0.03
CLSTN3-210ENST00000540931 A0A1W2PR80 420 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 IRGMA1A4Y4 181 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 DEFB108AA8MXU0 73 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 ZNF593O00488 134 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 GYPBP06028 91 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 STOMP27105 288 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 ATP6V1E1P36543 226 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 RAD52P43351 418 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 RGS6P49758 472 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 GDI2P50395 445 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 RIPPLY3P57055 190 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 CSNK2BP67870 215 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 HIST1H3AP68431 136 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 ADARB1P78563 741 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 PSG4Q00888 419 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 NAAAQ02083 359 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 BSPH1Q075Z2 132 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 SNTB1Q13884 538 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 PABPC1L2AQ5JQF8 200 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 HIST2H3PS2Q5TEC6 136 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 KCTD18Q6PI47 426 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 HIST2H3AQ71DI3 136 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 SLC16A9Q7RTY1 509 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 EGFL6Q8IUX8 553 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 SLC30A7Q8NEW0 376 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 ASB17Q8WXJ9 295 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 CNN2Q99439 309 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 COQ7Q99807 217 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 TMEM204Q9BSN7 226 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 Q9H521 79 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 ELOVL3Q9HB03 270 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 EMC7Q9NPA0 242 aa15.23■□□□□ 0.03
CLSTN3-210ENST00000540931 ADGRG4Q8IZF6 3080 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 IGHV1-18A0A0C4DH31 117 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 DPRXA6NFQ7 191 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 DLGAP1O14490 977 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 ABCD4O14678 606 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 DOK2O60496 412 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 CECR9P0C854 216 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 ELFN2Q5R3F8 820 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 ZNF691Q5VV52 312 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 SLC18B1Q6NT16 456 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 SLC22A25Q6T423 547 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 C22orf34Q6ZV56 151 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 ERI1Q8IV48 349 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 NUP37Q8NFH4 326 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 TFAP2CQ92754 450 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 SPTSSAQ969W0 71 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 ZNF75AQ96N20 296 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 BCL2L14Q9BZR8 327 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 CLEC4MQ9H2X3 399 aaPredicted RBP15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 NIPAL2Q9H841 368 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 MED20Q9H944 212 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 WDR76Q9H967 626 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 MRPL22Q9NWU5 206 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 NPAP1Q9NZP6 1156 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 POU2F3Q9UKI9 436 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 RPL36Q9Y3U8 105 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 LHFPL6Q9Y693 200 aa15.22■□□□□ 0.03
CLSTN3-210ENST00000540931 PDZD2O15018 2839 aa15.21■□□□□ 0.03
CLSTN3-210ENST00000540931 FAM171A2A8MVW0 826 aa15.21■□□□□ 0.03
CLSTN3-210ENST00000540931 SPARCP09486 303 aa15.21■□□□□ 0.03
CLSTN3-210ENST00000540931 CLUP10909 449 aa15.21■□□□□ 0.03
CLSTN3-210ENST00000540931 MTNR1AP48039 350 aa15.21■□□□□ 0.03
CLSTN3-210ENST00000540931 GRB2P62993 217 aaKnown RBP15.21■□□□□ 0.03
CLSTN3-210ENST00000540931 ACTC1P68032 377 aa15.21■□□□□ 0.03
CLSTN3-210ENST00000540931 ACTA1P68133 377 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms