RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ZNHIT1O43257 154 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 AQP8O94778 261 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 RPP14O95059 124 aaKnown RBP11.05□□□□□ -0.64
SMAD3-204ENST00000540846 SFTPCP11686 197 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 AGFG1P52594 562 aaKnown RBP11.05□□□□□ -0.64
SMAD3-204ENST00000540846 CLRN1P58418 232 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 PPP3R1P63098 170 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 SLC17A1Q14916 467 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 C3AR1Q16581 482 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 HIST3H3Q16695 136 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 MEP1BQ16820 701 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 KCTD18Q6PI47 426 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-204ENST00000540846 FAM180AQ6UWF9 173 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 UBQLNLQ8IYU4 475 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF679Q8IYX0 411 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 CISD2Q8N5K1 135 aaKnown RBP11.05□□□□□ -0.64
SMAD3-204ENST00000540846 OR52N5Q8NH56 324 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 OR10D3Q8NH80 312 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 OR2V1Q8NHB1 315 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 ACOT12Q8WYK0 555 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 KCTD12Q96CX2 325 aaKnown RBP11.05□□□□□ -0.64
SMAD3-204ENST00000540846 SNRNP40Q96DI7 357 aaKnown RBP11.05□□□□□ -0.64
SMAD3-204ENST00000540846 WDYHV1Q96HA8 205 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 RBP7Q96R05 134 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 OR14A2Q96R54 314 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 NAA11Q9BSU3 229 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-204ENST00000540846 ABHD6Q9BV23 337 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 PRDM14Q9GZV8 571 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 ABCB9Q9NP78 766 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 FRRS1LQ9P0K9 344 aa11.05□□□□□ -0.64
SMAD3-204ENST00000540846 TRBV5-5A0A0J9YX44 114 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF879B4DU55 563 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 EIF1AYO14602 144 aaKnown RBP11.04□□□□□ -0.64
SMAD3-204ENST00000540846 MPZL1O95297 269 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 NR2C1P13056 603 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF823P16415 610 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 RAC3P60763 192 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 RASGEF1BQ0VAM2 473 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 EIF2B1Q14232 305 aaKnown RBP11.04□□□□□ -0.64
SMAD3-204ENST00000540846 OTPQ5XKR4 325 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 SLC25A47Q6Q0C1 308 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 LRRN1Q6UXK5 716 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 DCDC5Q6ZRR9 648 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-204ENST00000540846 SNX29P2Q8IUI4 249 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 OR5AK2Q8NH90 309 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 ST7LQ8TDW4 575 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 RNF128Q8TEB7 428 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 NSMAFQ92636 917 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 C4orf45Q96LM5 186 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 MROQ9BYG7 248 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 LDAHQ9H6V9 325 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 ELOVL3Q9HB03 270 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 UGT2A1Q9Y4X1 527 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 ARHGAP21Q5T5U3 1957 aa11.04□□□□□ -0.64
SMAD3-204ENST00000540846 A0A1B0GTH9 108 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ISPDA4D126 451 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 TMEM212A6NML5 194 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 SMAD9O15198 467 aaKnown RBP11.03□□□□□ -0.64
SMAD3-204ENST00000540846 TBX1O43435 398 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 CXCL13O43927 109 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF432O94892 652 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 WNT11O96014 354 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 THBS2P35442 1172 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 CCR9P51686 369 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 CAMK2DQ13557 499 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF79Q15937 498 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 SFXN4Q6P4A7 337 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 MZT2AQ6P582 158 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 KRT77Q7Z794 578 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ADGRE4PQ86SQ3 457 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 LYSMD2Q8IV50 215 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 CENPSQ8N2Z9 138 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 PRSS35Q8N3Z0 413 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 MINDY2Q8NBR6 621 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 OR9K2Q8NGE7 335 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-204ENST00000540846 DERL3Q96Q80 235 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 UCN2Q96RP3 112 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 SDHCQ99643 169 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ASF1BQ9NVP2 202 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ZGRF1Q86YA3 2104 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 MED12LQ86YW9 2145 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 CACNA1CQ13936 2221 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ARPC4-TTLL3A0A0A6YYG9 625 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 OR14I1A6ND48 311 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ANKRD61A6NGH8 418 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF726A6NNF4 738 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 PIN1P1O15428 100 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF254O75437 659 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 RAB3BP20337 219 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 MAPK3P27361 379 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-204ENST00000540846 LAP3P28838 519 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 KIR3DL2P43630 455 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF133P52736 654 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-204ENST00000540846 RIDAP52758 137 aaKnown RBP11.03□□□□□ -0.64
SMAD3-204ENST00000540846 CLDN17P56750 224 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 OR10A3P58181 314 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 OXA1LQ15070 435 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms