RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PYURFQ96I23 114 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 DHRS1Q96LJ7 313 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 GPX7Q96SL4 187 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 GPA33Q99795 319 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 FUZQ9BT04 418 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 SAP30LQ9HAJ7 183 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ELOVL3Q9HB03 270 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 KRCC1Q9NPI7 259 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 NRIP3Q9NQ35 241 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ARL8BQ9NVJ2 186 aa16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 NDRG4Q9ULP0 352 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 COA3Q9Y2R0 106 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-212ENST00000539372 PLSCR5A0PG75 271 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ZSCAN5BA6NJL1 495 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 KHDRBS3O75525 346 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ABHD16AO95870 558 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 TFP02787 698 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 SEMG1P04279 462 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 GAAP10253 952 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 HSD17B1P14061 328 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ITGA2P17301 1181 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 SRP14P37108 136 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 CRYBB2P43320 205 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 HTR5AP47898 357 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ARHGDIAP52565 204 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 TEKQ02763 1124 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 SCRN3Q0VDG4 424 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 DPY19L2P2Q6ZN68 376 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 PTCHD4Q6ZW05 846 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 PGAM4Q8N0Y7 254 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 CDRT15Q96T59 188 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 POFUT1Q9H488 388 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 VSX1Q9NZR4 365 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 TAGLN3Q9UI15 199 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 MAGEL2Q9UJ55 1249 aa16.22■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ARPC2O15144 300 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 SGCEO43556 437 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ICMTO60725 284 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 GADD45GO95257 159 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 THBS2P35442 1172 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 LMO4P61968 165 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 KRTAP24-1Q3LI83 254 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 SAMD4BQ5PRF9 694 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 ARL9Q6T311 187 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 VASH1Q7L8A9 365 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 GLCCI1Q86VQ1 547 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 GLB1L2Q8IW92 636 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 FANK1Q8TC84 345 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 SLC7A6Q92536 515 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 WACQ9BTA9 647 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 REPIN1Q9BWE0 567 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 NUAK2Q9H093 628 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 MSL2Q9HCI7 577 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 HIF1ANQ9NWT6 349 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 CD300AQ9UGN4 299 aa16.21■□□□□ 0.19
TNFRSF1A-212ENST00000539372 PPP1R3DO95685 299 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 GPANK1O95872 356 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 MSMBP08118 114 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 CDKN2AP42771 156 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 CENPAP49450 140 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 RPS6KA3P51812 740 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 SMIM11AP58511 58 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 HNRNPA0Q13151 305 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 AQP6Q13520 282 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 HFEQ30201 348 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 SPRNQ5BIV9 151 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 FAM209AQ5JX71 171 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 C1orf94Q6P1W5 598 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 SMARCD3Q6STE5 483 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ZER1Q7Z7L7 766 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ADCK1Q86TW2 530 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 C1orf174Q8IYL3 243 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 MCUR1Q96AQ8 359 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 TMEM186Q96B77 213 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 NSMCE2Q96MF7 247 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 TSSK2Q96PF2 358 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 LRRC37BQ96QE4 947 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 PLEK2Q9NYT0 353 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ASH2LQ9UBL3 628 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ARL2BPQ9Y2Y0 163 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 GRIP1Q9Y3R0 1128 aa16.2■□□□□ 0.18
TNFRSF1A-212ENST00000539372 CLDN25C9JDP6 229 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 H3BSA7 217 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 TIMM8AO60220 97 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 COX5BP10606 129 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 DBPQ10586 325 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 PSG7Q13046 419 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ZNF771Q7L3S4 317 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 DEFB107AQ8IZN7 70 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 OR51F2Q8NH61 342 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 CCL17Q92583 94 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ELMOD3Q96FG2 381 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ERMAPQ96PL5 475 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 ZNF665Q9H7R5 613 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 CYSLTR2Q9NS75 346 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 POLR1DQ9Y2S0 133 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 WIPI2Q9Y4P8 454 aa16.19■□□□□ 0.18
TNFRSF1A-212ENST00000539372 RER1O15258 196 aa16.18■□□□□ 0.18
TNFRSF1A-212ENST00000539372 OR10H3O60404 316 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms