RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 CD180Q99467 661 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 ZDHHC3Q9NYG2 299 aa11.26□□□□□ -0.61
USP3-203ENST00000538686 STRAPQ9Y3F4 350 aaKnown RBP11.26□□□□□ -0.61
USP3-203ENST00000538686 PTPRDP23468 1912 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 IGSF6O95976 241 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 PPBPP02775 128 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 ZNF888P0CJ79 500 aaPredicted RBP11.25□□□□□ -0.61
USP3-203ENST00000538686 ARRB1P49407 418 aaPredicted RBP11.25□□□□□ -0.61
USP3-203ENST00000538686 SNRPNP63162 240 aaKnown RBP11.25□□□□□ -0.61
USP3-203ENST00000538686 SP3Q02447 781 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 TMPRSS12Q86WS5 348 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 CBARPQ8N350 705 aaPredicted RBP11.25□□□□□ -0.61
USP3-203ENST00000538686 ARL14Q8N4G2 192 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 ZNF615Q8N8J6 731 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 OR2AP1Q8NGE2 309 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 ABHD5Q8WTS1 349 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 FRZBQ92765 325 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 PDCD1LG2Q9BQ51 273 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 IL26Q9NPH9 171 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 DMRT3Q9NQL9 472 aa11.25□□□□□ -0.61
USP3-203ENST00000538686 PUS1Q9Y606 427 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP3-203ENST00000538686 C13orf42A0A1B0GVH6 325 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 CPSF4LA6NMK7 179 aaKnown RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 B4DEV8 164 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 K7EPK0 472 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 SMAD9O15198 467 aaKnown RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 PRICKLE3O43900 615 aaPredicted RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 GSTP1P09211 210 aaKnown RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 ELFN1P0C7U0 828 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 GLIPR1P48060 266 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 KLF3P57682 345 aaPredicted RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 ADAM8P78325 824 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 RASGEF1BQ0VAM2 473 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 DUSP5Q16690 384 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 Q499Y3 187 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 HIKESHIQ53FT3 197 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 RPL7L1Q6DKI1 246 aaKnown RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 SLC25A24Q6NUK1 477 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 KCTD9Q7L273 389 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 GCNT2Q8N0V5 402 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 FAM71E2Q8N5Q1 922 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 OR5K2Q8NHB8 316 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 THRSPQ92748 146 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 CORO2AQ92828 525 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 ZNF775Q96BV0 537 aaPredicted RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 ARSGQ96EG1 525 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 ZNF764Q96H86 408 aaPredicted RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 CNN2Q99439 309 aaKnown RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 EFCAB11Q9BUY7 163 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 HCAR1Q9BXC0 346 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 COMMD4Q9H0A8 199 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 RAB18Q9NP72 206 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 VSIG4Q9Y279 399 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 KIF26AQ9ULI4 1882 aaPredicted RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 TSPAN11A1L157 253 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 TLCD2A6NGC4 264 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 MSGN1A6NI15 193 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 KCNAB3O43448 404 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 ZNF432O94892 652 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 TXNDC12O95881 172 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 ZGLP1P0C6A0 271 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 BCKDHBP21953 392 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 BRS3P32247 399 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 LMAN2Q12907 356 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 PRSS53Q2L4Q9 553 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 NKAIN1Q4KMZ8 207 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 STPG1Q5TH74 334 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 ARL14EPQ8N8R7 260 aaPredicted RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 OR2L3Q8NG85 312 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 MFSD8Q8NHS3 518 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 ZCCHC10Q8TBK6 192 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 EID2BQ96D98 161 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 SEH1LQ96EE3 360 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 GNRHR2Q96P88 292 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 SYT3Q9BQG1 590 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 CST11Q9H112 138 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
USP3-203ENST00000538686 SH3BGRL2Q9UJC5 107 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 SLC25A13Q9UJS0 675 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 HS3ST3B1Q9Y662 390 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 PIKFYVEQ9Y2I7 2098 aa11.24□□□□□ -0.61
USP3-203ENST00000538686 A0A0A6YYH2 397 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 C20orf202A1L168 122 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 A6NJ64 397 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 ELOA3DA6NLF2 546 aaPredicted RBP11.23□□□□□ -0.61
USP3-203ENST00000538686 A6NNC1 897 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 H0YIZ8 118 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 LGALS2P05162 132 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 KLK1P06870 262 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 IL6RP08887 468 aaPredicted RBP11.23□□□□□ -0.61
USP3-203ENST00000538686 DANCRP0C864 163 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 CSRP1P21291 193 aaKnown RBP11.23□□□□□ -0.61
USP3-203ENST00000538686 TLX1P31314 330 aaPredicted RBP11.23□□□□□ -0.61
USP3-203ENST00000538686 FRKP42685 505 aaPredicted RBP11.23□□□□□ -0.61
USP3-203ENST00000538686 UBE2KP61086 200 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 SELENOTP62341 195 aa11.23□□□□□ -0.61
USP3-203ENST00000538686 EGR3Q06889 387 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms