RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TMEM102Q8N9M5 508 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 TSLPQ969D9 159 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 MRGPRX1Q96LB2 322 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 OPALINQ96PE5 141 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 CLEC2LP0C7M8 214 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 PLXDC2Q6UX71 529 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 LHFPL2Q6ZUX7 228 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 USP51Q70EK9 711 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 ZNF346Q9UL40 294 aaKnown RBP16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 SLC5A6Q9Y289 635 aa16.59■□□□□ 0.25
SFSWAP-203ENST00000535236 IGHV3-64DA0A0J9YX35 117 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 A0A1W2PPC4 97 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 ACKR3P25106 362 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 SLC35A2P78381 396 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 ADIRFQ15847 76 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 ACKR1Q16570 336 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 NIPSNAP3BQ9BS92 247 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 ZCCHC4Q9H5U6 513 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 CHD4Q14839 1912 aa16.58■□□□□ 0.25
SFSWAP-203ENST00000535236 H0Y8G0 127 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 HMGN4O00479 90 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 SDHAP31040 664 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 CAMKMTQ7Z624 323 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 TMEM200AQ86VY9 491 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 SLC7A5P1Q8MH63 180 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 CLEC2DQ9UHP7 191 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 PPT2Q9UMR5 302 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 MYO9BQ13459 2157 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 TRABD2BA6NFA1 517 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 CXCL13O43927 109 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 GLULP15104 373 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 RFX2P48378 723 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 CLDN15P56746 228 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 ST8SIA1Q92185 356 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 URB1O60287 2271 aaKnown RBP16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 ARPC4-TTLL3A0A0A6YYG9 625 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 ELLP55199 621 aaPredicted RBP16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 PPP2CBP62714 309 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 PPP2CAP67775 309 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 LIPNQ5VXI9 398 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 THNSL2Q86YJ6 484 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 PELI3Q8N2H9 469 aa16.58■□□□□ 0.24
SFSWAP-203ENST00000535236 M0R135 149 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 CASP3P42574 277 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 BTG2P78543 158 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF799Q96GE5 643 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 B3GALT5Q9Y2C3 310 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 PLRG1O43660 514 aaKnown RBP16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 ZNF573Q86YE8 665 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 SPEM1Q8N4L4 309 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 MAFAQ8NHW3 353 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 CTSFQ9UBX1 484 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 MEIKINA0A087WXM9 373 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 GFYI3L273 518 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 FABP7O15540 132 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 FAM157BP0CG42 384 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 CCR9P51686 369 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 FOXC1Q12948 553 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 TMEM104Q8NE00 496 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 OXGR1Q96P68 337 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 MKRN2Q9H000 416 aaKnown RBP16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 SLC22A11Q9NSA0 550 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 PPP1R3CQ9UQK1 317 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 FITM1A5D6W6 292 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 SBK2P0C263 348 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 CPEP16870 476 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 NKX2-1P43699 371 aaPredicted RBP16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 SSX9Q7RTT3 188 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 MVB12AQ96EY5 273 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 QPCTLQ9NXS2 382 aa16.57■□□□□ 0.24
SFSWAP-203ENST00000535236 TMEM200CA6NKL6 621 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 ZFP92A6NM28 416 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 OR2J2O76002 312 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 CORO6Q6QEF8 472 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 DBX2Q6ZNG2 339 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 CDC20BQ86Y33 519 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 SLCO4A1Q96BD0 722 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 RAB19A4D1S5 217 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 XRCC2O43543 280 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 CT45A10P0DMU9 189 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 MAVSQ7Z434 540 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 KMT5CQ86Y97 462 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 S1PR3Q99500 378 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 FBXO4Q9UKT5 387 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 OR5H15A6NDH6 313 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 OR5H14A6NHG9 310 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 OR5H1A6NKK0 313 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 CALCBP10092 127 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 PAX6P26367 422 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 DUSP1P28562 367 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 NDUFA6P56556 154 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 TMEM207Q6UWW9 146 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 CCL4L1Q8NHW4 92 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 OR2A14Q96R47 310 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 MAGEB1P43366 347 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 DUSP8Q13202 625 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 KDF1Q8NAX2 398 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 UBAC2Q8NBM4 344 aa16.56■□□□□ 0.24
SFSWAP-203ENST00000535236 NMES1Q9C002 83 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms